Gene
| Gene Model ID | pfu_aug2.0_2864.1_15653 |
|---|---|
| Locus | scaffold2864.1 : 48036 ... 52599 : + |
| To GenomeBrowser | scaffold2864.1:48036..52599 |
| Genes list of scaffold | scaffold2864.1 |
| Synonym | pfu_aug1.0_20026.1_61963 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| nucleoporin-like protein 2 | GO:0043226 GO:0044464 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2864.1_15653.t1 | gi|676451415|ref|XP_009052698.1| | hypothetical protein LOTGIDRAFT_174789 [Lottia gigantea] | 3.00018e-42 |
| pfu_aug2.0_2864.1_15653.t1 | gi|524903775|ref|XP_005108080.1| | PREDICTED: nucleoporin-like protein 2-like isoform X1 [Aplysia californica] | 2.0e-27 |
| pfu_aug2.0_2864.1_15653.t1 | gi|594633827|ref|XP_007170378.1| | PREDICTED: nucleoporin-like protein 2 [Balaenoptera acutorostrata scammoni] | 3.0e-24 |
| pfu_aug2.0_2864.1_15653.t1 | gi|556981247|ref|XP_005997156.1| | PREDICTED: nucleoporin-like protein 2 isoform X2 [Latimeria chalumnae] | 2.0e-22 |
| pfu_aug2.0_2864.1_15653.t1 | gi|556981244|ref|XP_005997155.1| | PREDICTED: nucleoporin-like protein 2 isoform X1 [Latimeria chalumnae] | 3.0e-22 |
Transcript
| Transcript ID | pfu_aug2.0_2864.1_15653.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2864.1_15653.t1 atgaccgagtgggaaaagaacaaaatgtggccattttcctgcatggcgtttgagaaagaggcgccttgtattccagattt tgtggacacatcaccagaggagttgagactcgcagcgtatgaagctttaaaagacaacaatatacaaccttatattcagc aagtgcagtctttgtcagaggaatacagtaagaaaagacagatgattcggcaagccaacttgacactaagacagaaactg attgctttgattgatgagtatagattaaagaagagcaggtcctcacagccctcaggtttattcagtgccggcagcagtac caacaatctttttggaaatcagtcatcattcatgagctcaacttttggtaacgctcctacacagccatctcaaggtctgt ttggtaaagacaattctagtacggcaccagcatttccctctggcagttccggttttggaactcatgcctttggagcaact ccttccgttggaatcggatcgagtcccgcccctggtgcatatccttcctcaaattcatcatcacaaggaattttcggtgg ttaccaagctgcaggttcgtttgatgcccaggcacagccttttggctcatcaccagcaccatctgcctttggtgctactt ctagtgctttcggtgccacaccatcacaaggcctcttcagtgctggtgccttacaaagtccttttggttctggtgcaagt gcctcaccaagccctttcagttctggtgcaaactcaacatcaagtgtaggatttagtaaacctaacactagtggtactgg tgcattcggacaaagcaatgccagcggtgcatcagggcagcctagtgaaagtgacgtcacaagcaccgtatacacaccaa tagataaacttacaccaaaggagctggcagaattcaaagcccctcattttacattgggaaatctccctacgaaacctcca ccaaaggagctctgtttttaa |
|
Protein
| Protein ID | pfu_aug2.0_2864.1_15653.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2864.1_15653.t1 MTEWEKNKMWPFSCMAFEKEAPCIPDFVDTSPEELRLAAYEALKDNNIQPYIQQVQSLSEEYSKKRQMIRQANLTLRQKL IALIDEYRLKKSRSSQPSGLFSAGSSTNNLFGNQSSFMSSTFGNAPTQPSQGLFGKDNSSTAPAFPSGSSGFGTHAFGAT PSVGIGSSPAPGAYPSSNSSSQGIFGGYQAAGSFDAQAQPFGSSPAPSAFGATSSAFGATPSQGLFSAGALQSPFGSGAS ASPSPFSSGANSTSSVGFSKPNTSGTGAFGQSNASGASGQPSESDVTSTVYTPIDKLTPKELAEFKAPHFTLGNLPTKPP PKELCF |
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