Gene
| Gene Model ID | pfu_aug2.0_287.1_23805 |
|---|---|
| Locus | scaffold287.1 : 85296 ... 89919 : + |
| To GenomeBrowser | scaffold287.1:85296..89919 |
| Genes list of scaffold | scaffold287.1 |
| Synonym | pfu_aug1.0_3529.1_52005 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_287.1_23805.t1 | 1 | 1 | gag-asp_proteas | 91 | 126 | 4.9e-06 | 26.2 | 2.6e-09 | 9.6e-06 | 25.3 |
| pfu_aug2.0_287.1_23805.t1 | 1 | 1 | RVP | 92 | 194 | 2.4e-06 | 27.3 | 2.4e-09 | 8.8e-06 | 25.5 |
| pfu_aug2.0_287.1_23805.t1 | 1 | 1 | RVT_1 | 284 | 426 | 1.9e-09 | 37.1 | 1.0e-12 | 3.8e-09 | 36.2 |
Transcript
| Transcript ID | pfu_aug2.0_287.1_23805.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_287.1_23805.t1 atgggagacaaaggcgaagctgttgccgctcctaatgtcgtgtttgttcccagtaacattccgcttcctggaaaattgga tattaaaagaaacttatctacgaactggaaaaagttcaaaagggtatggagtaactacgaaatcgccagtaatctaaggc aaaaagacaacgaaatgaggactgccacatttctaacgtgtgtaggtgctgatgcactggaactacttgatggatttcac ttcgaaaatgagaacgacaagacagacgttgacaagcgcttgtatgccgagctggaaatcgaagggcaacgtgtaaagtt tttactcgactgtggtgctacagtcaatgtcataaatgaaagtttgtacaaatctctgtaccgtgatgacaacctctctg gtcttcggaaggacgacatgacattggtcatgttcaataaaacagaagtcaaaccgacaggaactcgtcgtgtatccgtc cgaaatccaaaaaaccgaaagaaatatagcattgaaatggtagtcgtaccgggaaatctcaagccgatactcggatctaa ggttatccaaggaatgaaaatgataaccgtcaatcaggaaaacatcgctgccgttgaatcaaccgatgtattggagcgat tcacagatgtgtttcagggcctagggaaatttcaaggtacgctacatcttgatatcgataagtcgataccccctaccaaa ataccaacgagaaaagtacctttagccgttaaaaaactgctgaaagaggaacttgagcgactgacagatctaggtgtgat aactcctgtcacagaacctacagactggatatcttcacttgtcgcagtaaagaaaccaaccggaaaaatgcgtctctgca tcgatccgaaacctctcaacaaagcgcttaaaagaagtcactacactactcctactatagaagacatacttcccgaatta aacaaggcaaaagttttctcagtgctagactgcaaagatggattctggcacgtcgagttagatgaacaaagtagtttgct gactacattcggaacgccttggggaagattcagatggttacgtatgccttttggtataaaaccagcaagtgaggaatttc agcgtcgaattgatgaagctttagaaggcctatctggaattaaagctgtacacgatgatattgtcgtatggggatctgga gacacagatcaggaagcaatggctaatcatgacgcgaatctggaaaatctactgaaaagatgtagacaaaagggcatgga cagagacataatggatatagccgcagaaacggctggtaggggtgtgttggccgcaggaatctacattgaacaaatctgga actcaaattcagggtacagccggcatgaatcggcaaattttccaggggatcattga |
|
Protein
| Protein ID | pfu_aug2.0_287.1_23805.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_287.1_23805.t1 MGDKGEAVAAPNVVFVPSNIPLPGKLDIKRNLSTNWKKFKRVWSNYEIASNLRQKDNEMRTATFLTCVGADALELLDGFH FENENDKTDVDKRLYAELEIEGQRVKFLLDCGATVNVINESLYKSLYRDDNLSGLRKDDMTLVMFNKTEVKPTGTRRVSV RNPKNRKKYSIEMVVVPGNLKPILGSKVIQGMKMITVNQENIAAVESTDVLERFTDVFQGLGKFQGTLHLDIDKSIPPTK IPTRKVPLAVKKLLKEELERLTDLGVITPVTEPTDWISSLVAVKKPTGKMRLCIDPKPLNKALKRSHYTTPTIEDILPEL NKAKVFSVLDCKDGFWHVELDEQSSLLTTFGTPWGRFRWLRMPFGIKPASEEFQRRIDEALEGLSGIKAVHDDIVVWGSG DTDQEAMANHDANLENLLKRCRQKGMDRDIMDIAAETAGRGVLAAGIYIEQIWNSNSGYSRHESANFPGDH |
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