Gene
| Gene Model ID | pfu_aug2.0_287.1_23809 |
|---|---|
| Locus | scaffold287.1 : 169640 ... 184561 : + |
| To GenomeBrowser | scaffold287.1:169640..184561 |
| Genes list of scaffold | scaffold287.1 |
| Synonym | pfu_aug1.0_88799.1_06111 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| t-complex protein 1 subunit beta | GO:0005524 GO:0005737 GO:0006457 GO:0051082 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_287.1_23809.t1 | 1 | 1 | Cpn60_TCP1 | 2 | 365 | 0.0 | 312.0 | 0.0 | 0.0 | 311.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_287.1_23809.t1 | gi|676474415|ref|XP_009060140.1| | hypothetical protein LOTGIDRAFT_210058 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_287.1_23809.t1 | gi|701381865|ref|XP_009988264.1| | PREDICTED: T-complex protein 1 subunit beta, partial [Tauraco erythrolophus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_287.1_23809.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_287.1_23809.t1 atgaacatagctagaacaactctgagctctaagatccttacacaatataaagatcactttgccaagttggctgtggatgc tgtacttagacttaagggaagtggtaatttagatgctattcacttaatcaagaaatcaggagccggattgaaggattcat atcttgatgaaggttttcttttagataaaaagattggtgtaaaccagcccaaaagaatagaaaatgctaaaatcctcgta gctaacactcctatggatacagataaagttaaggtgtttggctctaaagttcgagtagacgctatttcaaaggtagcaga aatagaattggcagagaaagagaaaatgagagacaaagtcaacaaaatcatcaaacacggatgtaatgtgttcatcaata ggcagctgatctataattatcctgagcaactatttgcagatgctggtattatggcaatagaacatgccgattttgaagga gttgaacgactctcattagtgacaggaggagaaattgtctctacatttgatacacctgactccgtcaaactcggcagatg tgatgttatagaggaagttattattggggaggacaaactcatcaaattctcaggcgtggccatgggagaggcatgtacta ttgtgttgaggggagccactaaacagatcctggacgaggctgacaggtcactacacgacgccctctgtgttctcacccag actgtcaaaaacacaaagacagtctatggaggaggtagtgccgaaatgttgatggcagatgctgtatctaaattagcagc aaaaacaccaggaaaagaagctgtggccatggaggcattcgccaaagcactcagaatgctaccaaccacaatagctgata atgctggttatgatagtgcacagttaatatcagagttacgggcccttcacactgatggcaaacataccatgggactgaat atgactgatggagaggtggctgacgtagagaagatgggcattacagaatcgttccaggtcaaacggcaaatgttactcag tgcttcagaagctgcagaaatgatcatcaggattgatgacatcatcaaatcagcaccgcgaccaaggcaaccggaccata gaggacactag |
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Protein
| Protein ID | pfu_aug2.0_287.1_23809.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_287.1_23809.t1 MNIARTTLSSKILTQYKDHFAKLAVDAVLRLKGSGNLDAIHLIKKSGAGLKDSYLDEGFLLDKKIGVNQPKRIENAKILV ANTPMDTDKVKVFGSKVRVDAISKVAEIELAEKEKMRDKVNKIIKHGCNVFINRQLIYNYPEQLFADAGIMAIEHADFEG VERLSLVTGGEIVSTFDTPDSVKLGRCDVIEEVIIGEDKLIKFSGVAMGEACTIVLRGATKQILDEADRSLHDALCVLTQ TVKNTKTVYGGGSAEMLMADAVSKLAAKTPGKEAVAMEAFAKALRMLPTTIADNAGYDSAQLISELRALHTDGKHTMGLN MTDGEVADVEKMGITESFQVKRQMLLSASEAAEMIIRIDDIIKSAPRPRQPDHRGH |
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