Gene
| Gene Model ID | pfu_aug2.0_287.1_23812 |
|---|---|
| Locus | scaffold287.1 : 283613 ... 306369 : - |
| To GenomeBrowser | scaffold287.1:283613..306369 |
| Genes list of scaffold | scaffold287.1 |
| Synonym | pfu_aug1.0_2759.1_66450 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_287.1_23812.t1 | 1 | 1 | PDZ | 90 | 160 | 1.4e-07 | 31.5 | 1.4e-10 | 4.0e-07 | 30.1 |
| pfu_aug2.0_287.1_23812.t1 | 2 | 1 | PH | 208 | 253 | 7.5e-15 | 55.0 | 1.1 | 3300.0 | -1.7 |
| pfu_aug2.0_287.1_23812.t1 | 2 | 2 | PH | 643 | 735 | 7.5e-15 | 55.0 | 1.5e-17 | 4.4e-14 | 52.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_287.1_23812.t1 | gi|676431226|ref|XP_009046181.1| | hypothetical protein LOTGIDRAFT_237832 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_287.1_23812.t1 | gi|524903636|ref|XP_005108014.1| | PREDICTED: connector enhancer of kinase suppressor of ras 2-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_287.1_23812.t1 | gi|676431229|ref|XP_009046182.1| | hypothetical protein LOTGIDRAFT_171735 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_287.1_23812.t1 | gi|512859552|ref|XP_002938591.2| | 1.99965e-42 | |
| pfu_aug2.0_287.1_23812.t1 | gi|657797436|ref|XP_008325778.1| | PREDICTED: connector enhancer of kinase suppressor of ras 2-like [Cynoglossus semilaevis] | 8.00001e-42 |
Transcript
| Transcript ID | pfu_aug2.0_287.1_23812.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_287.1_23812.t1 atgacgcttaaaaaccttgtgtcctggctcgatagagctccatttgaatctatatatgatatgggattgttcaggaacac tgtagtgaagcttgggatggatcttatagcagcgtgtcaaaaagacggcacggaagtagacgtagaggataatattgtta aatgttgccatatgttagctgatatttgtgaagacctgacattaagtaacgcagaatccctcatgtttcagccagcctac ttagaattagcaactatcaggaaaaagccaggggaagaattggggatgcatattctctcttcatactatggtgttcatgt gattggggccatcaaagatatgtcaccagcagatttatgcagaaaaatagagaagggagatgaagtagtacaggtcaatc agaagactgtggttggttggcagctgaagaagttagttaactgtctgaaggagaaacccaaagaggtggccttattactg aagaaacgacctcagcatatgaacccgtttggccagaataacaaccgtaaaaagcagctgaagaacctgcacgcacccca ggtctccaccctacccaagaaaaggacgtctagggccggggaggaggccaaacagatcagaccctccctacatgagctgg tgtcttctatacctacagaggacttgtactcacccaaggaggagagaacctcagatgaaaaagatgatggtaatgacact gacaatgatgtgttccgtagtgggtccgagtctccacagtacacacttcctgtagtggtggaccccaaacagaggagagc cacagtcagtggtggatctcccaccctcagcagaccactcctagttatagatgaccttgacacacccactcgacctaagt ctttcactgtggggacggccgatgcttcacagacagaatataaagatctcctagtaccaggagcagatggttcaccgatg ttaaatggaagtttgaaaggtggcggtgtacaaaataaaagacaggaatataaagtaaataagcctggacaacagtcgct ggagtttactgtcaaaaagcccataccagtactgcaagagccggacaaggagttggtgctacaagacctgagagagcaga aaaaggtgctggacctgttagaagtaccatctcagttccagaacccaaatcatagggcttacgaaagtacaacagatgat gttgatgatgatgatgaggacaaggaagatgatgatgagaaggtagacaatgggactacagaggagttggaagaatctga aaaacagattgaaaataaggaagatgtgacagagggagacaaggtcagcattgccactacggtcactgagagtaagacgg aagatgatgctggtgatcaatctacgcaagatgaagtgactacagacgtatcgactccagataaacctacgttagacgac catcacacgggatctgactttgacgagtcaaataaaccagagaataagagtttggttagtgtagaggcaagagatgaatg tgcttcttctgcaccctcggccatgcatgtacatgtacccacacgccgtgaactgcatgcttcttatgtagattatgaag ccaaatcatcccctgctgaatcttctgtggctacaaatagaaaacacaaaagtgaacccaaattgatagctataagaaaa atagattctttaacagcagcggatgtgaaatccggaggaaagttggtgacattctctagtcctaaagaaaagcagcaaga agtcagctacaccactatagtggtaggaggagtagtgcagaaaatccccatagagtctgggtcatcaacccctacagata tgagttctccagttacactaagaaagaagaaagtgaacaagagagttgataggagagtatcgtgtaaggacctcggtgag ggggattgtgaaggatacctatacaaacgtaaacagaaacacggaattctgtcgggtagtaactggcttaaacgttggtg tgtcctcaaacagtataatctgttttacttcaaggataaagaggatctgaaggcagaaggcgtcctacatctcccagcat tccaagtctcaccagccaatgatatcaccaaaaggaaacatgcattcaaagtccacaatgcgggaacaacgtttgtgttt gcatcagagagccaaaatgacatgagaaagtggatgaacaagcttggtctagcagccattaacttctctccgccaaaagt gatcaaaccccacggctcaccaaaacactcacctgggaataaaaatgatgagttttatagtgagagtgaggatgaagatg acagtaaggatccactgacgagatctgcttcgtccgggagctgtacgtcactcagtagtcagacctctacaccagagaga gaggtgaaagtttataagaaaggacagagtatggaagacctgacgtcactgatgaggagtatagagaaagaggacctcac actgacagggcagagtaaacagttaaaaagacgcaataccatcagggcctcaaagagggcagtacgtaaaggagcccagg cagcggcagaattaccaccatcatcctccgacgaacatataaataaagtcaaaaagatcaactgtctgaaacgaactctc aaggcaaaggagcaagagctagctgatatagagaaagcattaactgagaaaacagtgagtggagatagcttaaaggcttt aatggaacatatacgtgagcatgacttcgcttga |
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Protein
| Protein ID | pfu_aug2.0_287.1_23812.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_287.1_23812.t1 MTLKNLVSWLDRAPFESIYDMGLFRNTVVKLGMDLIAACQKDGTEVDVEDNIVKCCHMLADICEDLTLSNAESLMFQPAY LELATIRKKPGEELGMHILSSYYGVHVIGAIKDMSPADLCRKIEKGDEVVQVNQKTVVGWQLKKLVNCLKEKPKEVALLL KKRPQHMNPFGQNNNRKKQLKNLHAPQVSTLPKKRTSRAGEEAKQIRPSLHELVSSIPTEDLYSPKEERTSDEKDDGNDT DNDVFRSGSESPQYTLPVVVDPKQRRATVSGGSPTLSRPLLVIDDLDTPTRPKSFTVGTADASQTEYKDLLVPGADGSPM LNGSLKGGGVQNKRQEYKVNKPGQQSLEFTVKKPIPVLQEPDKELVLQDLREQKKVLDLLEVPSQFQNPNHRAYESTTDD VDDDDEDKEDDDEKVDNGTTEELEESEKQIENKEDVTEGDKVSIATTVTESKTEDDAGDQSTQDEVTTDVSTPDKPTLDD HHTGSDFDESNKPENKSLVSVEARDECASSAPSAMHVHVPTRRELHASYVDYEAKSSPAESSVATNRKHKSEPKLIAIRK IDSLTAADVKSGGKLVTFSSPKEKQQEVSYTTIVVGGVVQKIPIESGSSTPTDMSSPVTLRKKKVNKRVDRRVSCKDLGE GDCEGYLYKRKQKHGILSGSNWLKRWCVLKQYNLFYFKDKEDLKAEGVLHLPAFQVSPANDITKRKHAFKVHNAGTTFVF ASESQNDMRKWMNKLGLAAINFSPPKVIKPHGSPKHSPGNKNDEFYSESEDEDDSKDPLTRSASSGSCTSLSSQTSTPER EVKVYKKGQSMEDLTSLMRSIEKEDLTLTGQSKQLKRRNTIRASKRAVRKGAQAAAELPPSSSDEHINKVKKINCLKRTL KAKEQELADIEKALTEKTVSGDSLKALMEHIREHDFA |
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