Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_287.1_23813
Locus scaffold287.1 : 309150 ... 314872 : +
To GenomeBrowser scaffold287.1:309150..314872
Genes list of scaffold scaffold287.1
Synonym pfu_aug1.0_2759.1_66449

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_287.1_23813.t1 gi|242002160|ref|XP_002435723.1| hypothetical protein IscW_ISCW018563 [Ixodes scapularis] 1.0e-14
pfu_aug2.0_287.1_23813.t1 gi|312084423|ref|XP_003144270.1| hypothetical protein LOAG_08692 [Loa loa] 2.0e-12
pfu_aug2.0_287.1_23813.t1 gi|308461741|ref|XP_003093159.1| hypothetical protein CRE_07826 [Caenorhabditis remanei] 4.0e-12
pfu_aug2.0_287.1_23813.t1 gi|193208236|ref|NP_504057.3| H10D18.5 [Caenorhabditis elegans] 7.0e-12
pfu_aug2.0_287.1_23813.t1 gi|268555964|ref|XP_002635971.1| Hypothetical protein CBG01202 [Caenorhabditis briggsae] 2.0e-10

Transcript
Transcript IDpfu_aug2.0_287.1_23813.t1
Definition-
>pfu_aug2.0_287.1_23813.t1
atggtgtttaaagaggaggggttatactgcacatccctgggggaaatgctcacgatgtcttccctcccaaactatcacat
ccaggctaaagtcatcgtgtacaaggacgaggcaagcttcaagcagaattggaaagggaaagcagaaaccaacgttaagg
aggctacatttttagaggggatacttctgaagagtttaattccagggcctaacctttatgtggattattcagtgttctat
gcaggtgttcacgaggaaaatagaggatccacaaatggaggagtaatcaatccactgacaaaagttctccacatacaaaa
tcattcttattccacagagatcaccgctggcagaaaagctcaagagggcttttatgacgagatacaatgcattctgagga
aaggagtgagacagcttcctagaactccagtcagcaaggatagtgtttatatcctaataggcttccatagctttgaagag
acaaaaacactcgagaaaagatggaaatgttggagtggggccgactgcatactgtggaactgccctactgagctcaatct
acgacgagtaacgtttctgaaacatacaacagattctgacgagttttcttacttttgtctcggtgaatgtgaagaaggtt
tgaattatttaaacctagctttagatttcatggaaactttgcgacttcgacattgcggccttgtcgggttgtataaagtt
gaacgttattacattccacctcagagggctcagaacctcaccaaacctcccagctga

Protein
Protein IDpfu_aug2.0_287.1_23813.t1
Definition-
>pfu_aug2.0_287.1_23813.t1
MVFKEEGLYCTSLGEMLTMSSLPNYHIQAKVIVYKDEASFKQNWKGKAETNVKEATFLEGILLKSLIPGPNLYVDYSVFY
AGVHEENRGSTNGGVINPLTKVLHIQNHSYSTEITAGRKAQEGFYDEIQCILRKGVRQLPRTPVSKDSVYILIGFHSFEE
TKTLEKRWKCWSGADCILWNCPTELNLRRVTFLKHTTDSDEFSYFCLGECEEGLNYLNLALDFMETLRLRHCGLVGLYKV
ERYYIPPQRAQNLTKPPS

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495