Gene
| Gene Model ID | pfu_aug2.0_2876.1_22219 |
|---|---|
| Locus | scaffold2876.1 : 10492 ... 14655 : - |
| To GenomeBrowser | scaffold2876.1:10492..14655 |
| Genes list of scaffold | scaffold2876.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| probable isocitrate dehydrogenase | GO:0000287 GO:0004449 GO:0005739 GO:0006099 GO:0051287 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2876.1_22219.t1 | 2 | 1 | Iso_dh | 3 | 39 | 3.0e-34 | 118.5 | 5.8e-15 | 2.9e-11 | 42.9 |
| pfu_aug2.0_2876.1_22219.t1 | 2 | 2 | Iso_dh | 52 | 121 | 3.0e-34 | 118.5 | 2.3e-24 | 1.1e-20 | 73.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2876.1_22219.t1 | gi|350402017|ref|XP_003486337.1| | 1.0e-32 | |
| pfu_aug2.0_2876.1_22219.t1 | gi|380020338|ref|XP_003694044.1| | 1.0e-32 | |
| pfu_aug2.0_2876.1_22219.t1 | gi|340714951|ref|XP_003395985.1| | 2.0e-32 | |
| pfu_aug2.0_2876.1_22219.t1 | gi|571534141|ref|XP_006564183.1| | PREDICTED: probable isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial-like [Apis mellifera] | 5.0e-32 |
| pfu_aug2.0_2876.1_22219.t1 | gi|383855602|ref|XP_003703299.1| | PREDICTED: probable isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial [Megachile rotundata] | 2.0e-31 |
Transcript
| Transcript ID | pfu_aug2.0_2876.1_22219.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2876.1_22219.t1 atgttggctgtgtactgtcaggttcatggtacggctcctgacatagcaggtcaggacaaagccagtcctatggctctgtt acttagtgccgttatgatgttgaggtatatgggactcggtgattacctatgtttatatcattacaggttcatggttcatg gtacggctcctgacatagcaggtcaggacaaagccaatcctacagctctgttactcagtgccgttatgatgttgaggtat atgggacttggtgattatggcagaaggatagagactgcagctttagatgtcatcagagagggaaagcatcttactggtga tttgggaggaagagccaaatgttcagagtttacagcagaaatctgccgaaaacctatcatacactga |
|
Protein
| Protein ID | pfu_aug2.0_2876.1_22219.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2876.1_22219.t1 MLAVYCQVHGTAPDIAGQDKASPMALLLSAVMMLRYMGLGDYLCLYHYRFMVHGTAPDIAGQDKANPTALLLSAVMMLRY MGLGDYGRRIETAALDVIREGKHLTGDLGGRAKCSEFTAEICRKPIIH |
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