Gene
| Gene Model ID | pfu_aug2.0_2876.1_22220 |
|---|---|
| Locus | scaffold2876.1 : 16147 ... 30435 : - |
| To GenomeBrowser | scaffold2876.1:16147..30435 |
| Genes list of scaffold | scaffold2876.1 |
| Synonym | pfu_aug1.0_24279.1_40478 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| probable isocitrate dehydrogenase | GO:0000287 GO:0004449 GO:0005739 GO:0006099 GO:0051287 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2876.1_22220.t1 | 1 | 1 | Iso_dh | 59 | 359 | 0.0 | 311.2 | 0.0 | 0.0 | 310.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2876.1_22220.t1 | gi|524871885|ref|XP_005092713.1| | PREDICTED: probable isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial-like isoform X2 [Aplysia californica] | 0.0 |
| pfu_aug2.0_2876.1_22220.t1 | gi|524871883|ref|XP_005092712.1| | PREDICTED: probable isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_2876.1_22220.t1 | gi|676473116|ref|XP_009059712.1| | hypothetical protein LOTGIDRAFT_192884 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_2876.1_22220.t1 | gi|572261107|ref|XP_006608855.1| | PREDICTED: probable isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial-like [Apis dorsata] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_2876.1_22220.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2876.1_22220.t1 atgcagagcatactcatctgggagcaggctgattacaatgatacctggagatggcattggtccagagatatctgcatcag tcaaagaaatattccgggcagcagatgtattacttgttttctttttattgactatgatacagttcagggaggggtgggac aacaactgtatcaccattatgcacctgtagaatgggaggatgttgatgtaacaccagttaaaggccctgatggaaactat aagctccctgctaaaatatttgaatcaatgggaaaaacaaaagttggactgaaggggccacttgagaccccagtgggaaa aggccacaggtccctcaatctagctcttagaaaggagttcaatttgtatgccaatgtgagaccatgtaaaagtattgaag gttatcagacagcgtatccatcagtagatcttgttactatcagagaaaatacagagggggagtattcaggcatagagcat gagttagccaagggattagtgcagagtgtaaagaaaatcacagagaaagcttcaatgagagttgctgagtatgcctttgc ttatgctagagacaacaacagacacactgtgacagctgtacataaagctaatgtcatgaaaatgtctgatggacttttct taaaatgttgtcggacagtagcagagagaaacaaagatattaagtttgaagaaatgtatcttgacactgtctgtttaaat atgccaaaggatcccacacagtttgatgtattggttatgccaaatctatatggagatatattgagtgacttgtgtgcagg tttgataggaggacttggagtaacaccaagtggaaatatcggtgaagacggagctatttttgagtcggttcatggtacag ctcctgacatagcaggtcaggacaaagccaatcctacggctctgttactcagtgctgttatgatgttgaggtatatggga ctcggtgattatggcaggaggatagagactgcagctttagacgtcatcagagagggaaagcatcttactggtgatttggg aggaagagctaaatgttcagagtttacagcagaaatctgccgaaaagtacgagaacttgattaa |
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Protein
| Protein ID | pfu_aug2.0_2876.1_22220.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2876.1_22220.t1 MQSILIWEQADYNDTWRWHWSRDICISQRNIPGSRCITCFLFIDYDTVQGGVGQQLYHHYAPVEWEDVDVTPVKGPDGNY KLPAKIFESMGKTKVGLKGPLETPVGKGHRSLNLALRKEFNLYANVRPCKSIEGYQTAYPSVDLVTIRENTEGEYSGIEH ELAKGLVQSVKKITEKASMRVAEYAFAYARDNNRHTVTAVHKANVMKMSDGLFLKCCRTVAERNKDIKFEEMYLDTVCLN MPKDPTQFDVLVMPNLYGDILSDLCAGLIGGLGVTPSGNIGEDGAIFESVHGTAPDIAGQDKANPTALLLSAVMMLRYMG LGDYGRRIETAALDVIREGKHLTGDLGGRAKCSEFTAEICRKVRELD |
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