Gene
| Gene Model ID | pfu_aug2.0_2876.1_22222 |
|---|---|
| Locus | scaffold2876.1 : 47886 ... 62868 : + |
| To GenomeBrowser | scaffold2876.1:47886..62868 |
| Genes list of scaffold | scaffold2876.1 |
| Synonym | pfu_aug1.0_149.1_65262 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2876.1_22222.t1 | 1 | 1 | TB2_DP1_HVA22 | 59 | 149 | 2.2e-34 | 117.0 | 4.0e-38 | 3.0e-34 | 116.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2876.1_22222.t1 | gi|676421818|ref|XP_009043866.1| | hypothetical protein LOTGIDRAFT_149167 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_2876.1_22222.t1 | gi|524883560|ref|XP_005098407.1| | PREDICTED: receptor expression-enhancing protein 5-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_2876.1_22222.t1 | gi|524883562|ref|XP_005098408.1| | PREDICTED: receptor expression-enhancing protein 5-like isoform X2 [Aplysia californica] | 0.0 |
| pfu_aug2.0_2876.1_22222.t1 | gi|557014895|ref|XP_006007937.1| | PREDICTED: receptor expression-enhancing protein 5 isoform X2 [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_2876.1_22222.t1 | gi|557014893|ref|XP_006007936.1| | PREDICTED: receptor expression-enhancing protein 5 isoform X1 [Latimeria chalumnae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_2876.1_22222.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2876.1_22222.t1 atggcaaaagcagtatcagataatgtggagaattggaaagccaaacttgacaaacttcttcatgaaaagaacgcagttac cgatctgctggagaaagtagagcaaaagactggcgttcgacgactttacttggcaataggtgtggcagcaatcttagcct tgtatctgatggtggggtatggagcacagttcctgtgtaactttataggattcctttaccctgcatatgcttcatttaag gcggtagagagtacacagaaggatgatgatacaacctggctgatctactgggtggtatacgctttcttctctctgctgga attcttcacagacatcttcctcttctggattccattctattggctgttgaagtgtatcttcctgatttggtgtatggtgc ccaccagttacaatggatctcagatgatctacttcaagatcattcccgagtcagtgccgttaagacttggctaa |
|
Protein
| Protein ID | pfu_aug2.0_2876.1_22222.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2876.1_22222.t1 MAKAVSDNVENWKAKLDKLLHEKNAVTDLLEKVEQKTGVRRLYLAIGVAAILALYLMVGYGAQFLCNFIGFLYPAYASFK AVESTQKDDDTTWLIYWVVYAFFSLLEFFTDIFLFWIPFYWLLKCIFLIWCMVPTSYNGSQMIYFKIIPESVPLRLG |
|