Gene
| Gene Model ID | pfu_aug2.0_2882.1_09007 |
|---|---|
| Locus | scaffold2882.1 : 33936 ... 35850 : + |
| To GenomeBrowser | scaffold2882.1:33936..35850 |
| Genes list of scaffold | scaffold2882.1 |
| Synonym | pfu_aug1.0_4271.1_01686 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| transcription factor hes-4-b-like isoform x1 | GO:0000122 GO:0000981 GO:0002085 GO:0002088 GO:0002682 GO:0003151 GO:0003281 GO:0005634 GO:0007155 GO:0007219 GO:0007389 GO:0008284 GO:0014014 GO:0014029 GO:0019827 GO:0021501 GO:0021545 GO:0021983 GO:0031016 GO:0033504 GO:0035909 GO:0042491 GO:0043066 GO:0043565 GO:0045165 GO:0045685 GO:0045893 GO:0046427 GO:0046982 GO:0048534 GO:0048598 GO:0048642 GO:0051094 GO:0051179 GO:0051240 GO:0061008 GO:0072078 GO:2000981 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2882.1_09007.t1 | 1 | 1 | HLH | 19 | 76 | 3.5e-15 | 55.4 | 1.2e-18 | 5.8e-15 | 54.7 |
| pfu_aug2.0_2882.1_09007.t1 | 1 | 1 | Hairy_orange | 93 | 131 | 5.7e-12 | 45.1 | 2.6e-15 | 1.3e-11 | 44.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2882.1_09007.t1 | gi|676468025|ref|XP_009058075.1| | hypothetical protein LOTGIDRAFT_209713 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_2882.1_09007.t1 | gi|602668954|ref|XP_007440017.1| | PREDICTED: transcription factor HES-1-like [Python bivittatus] | 0.0 |
| pfu_aug2.0_2882.1_09007.t1 | gi|54292102|ref|NP_001005848.1| | transcription factor HES-1 isoform 1 [Gallus gallus] | 0.0 |
| pfu_aug2.0_2882.1_09007.t1 | gi|3913813|sp|O57337.1|HES1_CHICK | Transcription factor HES-1 | 0.0 |
| pfu_aug2.0_2882.1_09007.t1 | gi|583980575|ref|XP_006785602.1| | PREDICTED: transcription factor HES-4-B-like isoform X1 [Neolamprologus brichardi] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_2882.1_09007.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2882.1_09007.t1 atggatgaatttgatcaagaaaatcgctcttatccagaggagaaattcatgaccagaaagagtaagaaacctctgatgga gaagagaagaagagcccgtatcaataactgtttatcacagcttaaagccttagtactgcaggccatgaaaaaagatacga ctcattattccaaacttgagaaggcagatattttagagatgaccgtaaagtatctcaggaacctccagcgacgtcagatc agctcagcagtggctgccgatcccacagtggccgctaaattcactgtcggattcaatgaatgcgcatcggaagtggctcg ctaccttaataatgcccacggaattaacgaagatgtgcgaggacgcttgttaggacatatttcaaactgcgtccagaata caaactctcaacagatgcagaatttgcagatgggtcaagcgtttatgcaacctttgcacgtgcagattcccgctgctcag aatggactcggtgtaaaccatactcaaccggaaagtttacttactgcgccgcagaccatgttccagtctccggtttatct cacataa |
|
Protein
| Protein ID | pfu_aug2.0_2882.1_09007.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2882.1_09007.t1 MDEFDQENRSYPEEKFMTRKSKKPLMEKRRRARINNCLSQLKALVLQAMKKDTTHYSKLEKADILEMTVKYLRNLQRRQI SSAVAADPTVAAKFTVGFNECASEVARYLNNAHGINEDVRGRLLGHISNCVQNTNSQQMQNLQMGQAFMQPLHVQIPAAQ NGLGVNHTQPESLLTAPQTMFQSPVYLT |
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