Gene
| Gene Model ID | pfu_aug2.0_2882.1_09008 |
|---|---|
| Locus | scaffold2882.1 : 58586 ... 70295 : + |
| To GenomeBrowser | scaffold2882.1:58586..70295 |
| Genes list of scaffold | scaffold2882.1 |
| Synonym | pfu_aug1.0_164384.1_28487 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| transcription factor hes-4-b-like isoform x1 | GO:0000904 GO:0001568 GO:0002065 GO:0003007 GO:0003677 GO:0005515 GO:0007420 GO:0008283 GO:0014031 GO:0021915 GO:0030509 GO:0045664 GO:0045892 GO:0048522 GO:0048646 GO:0048839 GO:0050768 GO:0072006 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2882.1_09008.t1 | 1 | 1 | HLH | 19 | 76 | 1.0e-14 | 53.9 | 4.6e-18 | 2.3e-14 | 52.8 |
| pfu_aug2.0_2882.1_09008.t1 | 1 | 1 | Hairy_orange | 92 | 132 | 1.4e-17 | 63.1 | 6.0e-21 | 3.0e-17 | 62.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2882.1_09008.t1 | gi|410921586|ref|XP_003974264.1| | PREDICTED: transcription factor HES-1 [Takifugu rubripes] | 0.0 |
| pfu_aug2.0_2882.1_09008.t1 | gi|658857771|ref|XP_008411570.1| | PREDICTED: transcription factor HES-4 isoform X1 [Poecilia reticulata] | 0.0 |
| pfu_aug2.0_2882.1_09008.t1 | gi|498998519|ref|XP_004554259.1| | PREDICTED: transcription factor HES-4 isoform X1 [Maylandia zebra] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_2882.1_09008.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2882.1_09008.t1 atgtctgtggacgtaatgaagaattacccatctaaggataacaagacatcactaagaaagagtaacaagccaatcatgga aaagaaaaggagagccagaattaacaactgcctgacacagctgaagaccttggttctggagtcaatgaagaaagatagtt cgcaatattcaaaattggagaaagctgacatcctagagatgacagtaaagtacttgcgcggcatacaaagacagcagctg tcctcggtaatcgcctcggaccctaacgtagtgtccaagtaccgagccgggtaccaagaatgcgccaccgaggttactcg ttatttgaattctaccagaaatgttgaaccagacgtcaaatccagacttgtgggacatttgagtgaatgtttacgcacac agtcaacatgtaacggacaatatcgcacatcaccgcatcatcaatccaacatagatgtcgccaccccattaagtgttcat attccacaaaacaattcaaacttttctcctgttgcgaattcaaatggacttttggtcgcaagtagtccgcaaatgcagca aaaccaaaccacgtgtcaacccatgttatcagcatcgcctgttcacaacgtgcagcagacgacaaatgtttcaggacaat ttcaaattcttcccgccagaaatgtgtacaatggaccaatcgcaatttacatgggcaatgtaaaccaatcaaattctccg tcacaaaattccattccagtttttaccttgcacgttccagagtcaaaggacgtttcgccttctcatgtagaaatttcgaa acaagcagacaatgcctatccttattctgggaagaatacagacagtgttatccgggcacgcgtacattatcacaatgaac gtgtttacaatgagaagttatggcgtccgtggtaa |
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Protein
| Protein ID | pfu_aug2.0_2882.1_09008.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2882.1_09008.t1 MSVDVMKNYPSKDNKTSLRKSNKPIMEKKRRARINNCLTQLKTLVLESMKKDSSQYSKLEKADILEMTVKYLRGIQRQQL SSVIASDPNVVSKYRAGYQECATEVTRYLNSTRNVEPDVKSRLVGHLSECLRTQSTCNGQYRTSPHHQSNIDVATPLSVH IPQNNSNFSPVANSNGLLVASSPQMQQNQTTCQPMLSASPVHNVQQTTNVSGQFQILPARNVYNGPIAIYMGNVNQSNSP SQNSIPVFTLHVPESKDVSPSHVEISKQADNAYPYSGKNTDSVIRARVHYHNERVYNEKLWRPW |
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