Gene
| Gene Model ID | pfu_aug2.0_289.1_30564 |
|---|---|
| Locus | scaffold289.1 : 49386 ... 67952 : + |
| To GenomeBrowser | scaffold289.1:49386..67952 |
| Genes list of scaffold | scaffold289.1 |
| Synonym | pfu_aug1.0_62230.1_70938 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_289.1_30564.t1 | 2 | 1 | EF-hand_7 | 46 | 103 | 1.3e-09 | 38.0 | 6.1e-13 | 1.3e-09 | 38.0 |
| pfu_aug2.0_289.1_30564.t1 | 3 | 1 | EF-hand_1 | 49 | 71 | 1.8e-12 | 45.5 | 1.0e-05 | 0.021 | 14.0 |
| pfu_aug2.0_289.1_30564.t1 | 2 | 1 | EF-hand_5 | 49 | 70 | 5.6e-07 | 28.6 | 0.0019 | 4.1 | 6.9 |
| pfu_aug2.0_289.1_30564.t1 | 2 | 1 | EF-hand_6 | 50 | 72 | 2.5e-10 | 39.3 | 3.6e-05 | 0.077 | 12.9 |
| pfu_aug2.0_289.1_30564.t1 | 3 | 1 | EF-hand_8 | 50 | 70 | 1.0e-05 | 25.0 | 0.12 | 250.0 | 1.4 |
| pfu_aug2.0_289.1_30564.t1 | 3 | 2 | EF-hand_8 | 64 | 104 | 1.0e-05 | 25.0 | 4.9e-09 | 1.0e-05 | 25.0 |
| pfu_aug2.0_289.1_30564.t1 | 3 | 2 | EF-hand_1 | 82 | 107 | 1.8e-12 | 45.5 | 2.1e-11 | 4.5e-08 | 31.8 |
| pfu_aug2.0_289.1_30564.t1 | 2 | 2 | EF-hand_6 | 83 | 107 | 2.5e-10 | 39.3 | 2.1e-09 | 4.5e-06 | 26.0 |
| pfu_aug2.0_289.1_30564.t1 | 2 | 2 | EF-hand_5 | 84 | 102 | 5.6e-07 | 28.6 | 1.1e-08 | 2.3e-05 | 23.4 |
| pfu_aug2.0_289.1_30564.t1 | 2 | 2 | EF-hand_7 | 107 | 117 | 1.3e-09 | 38.0 | 0.39 | 820.0 | 0.2 |
| pfu_aug2.0_289.1_30564.t1 | 3 | 3 | EF-hand_1 | 108 | 117 | 1.8e-12 | 45.5 | 0.23 | 480.0 | 0.4 |
| pfu_aug2.0_289.1_30564.t1 | 3 | 3 | EF-hand_8 | 108 | 116 | 1.0e-05 | 25.0 | 0.3 | 640.0 | 0.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_289.1_30564.t1 | gi|568990699|ref|XP_006520249.1| | PREDICTED: calcyphosin-like protein isoform X2 [Mus musculus] | 0.0 |
| pfu_aug2.0_289.1_30564.t1 | gi|488522991|ref|XP_004453388.1| | 0.0 | |
| pfu_aug2.0_289.1_30564.t1 | gi|196010025|ref|XP_002114877.1| | hypothetical protein TRIADDRAFT_28500 [Trichoplax adhaerens] | 1.00053e-42 |
Transcript
| Transcript ID | pfu_aug2.0_289.1_30564.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_289.1_30564.t1 atggcagccacgagcagaaacaaccgggaactaatgcagaaatgtcagaagaagttaaattcgggggaagtcaaagaccc tgtggaaagattacggttgcaatgtctggccagaggagctagcggtatcaagggtttaggaagatcctttagaatcatgg atgatgatagtgatcggagtctcagcattagcgaattcaagaaaggtttacacgattatggagtggatgtggaaggcaat gtagcacaagaaatatttagtagaattgacaaggatggcagtggccaattatcttttgatgaatttttgatggcattaag ggtcacggaggaggaatttctcaattactacagcggagttagtgcttccatagacaatgatgcttatttcgacttaatga tgagaaatgcttggaagctttaa |
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Protein
| Protein ID | pfu_aug2.0_289.1_30564.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_289.1_30564.t1 MAATSRNNRELMQKCQKKLNSGEVKDPVERLRLQCLARGASGIKGLGRSFRIMDDDSDRSLSISEFKKGLHDYGVDVEGN VAQEIFSRIDKDGSGQLSFDEFLMALRVTEEEFLNYYSGVSASIDNDAYFDLMMRNAWKL |
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