Gene
| Gene Model ID | pfu_aug2.0_289.1_30566 |
|---|---|
| Locus | scaffold289.1 : 95810 ... 145485 : - |
| To GenomeBrowser | scaffold289.1:95810..145485 |
| Genes list of scaffold | scaffold289.1 |
| Synonym | pfu_aug1.0_23715.1_18950 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_289.1_30566.t1 | 1 | 1 | RVT_1 | 84 | 328 | 2.7e-38 | 131.4 | 1.19993e-41 | 4.3e-38 | 130.8 |
| pfu_aug2.0_289.1_30566.t1 | 1 | 1 | LSM | 436 | 499 | 2.3e-13 | 49.4 | 1.8e-16 | 6.7e-13 | 47.9 |
| pfu_aug2.0_289.1_30566.t1 | 1 | 1 | TraB | 650 | 947 | 1.5e-18 | 67.2 | 5.8e-21 | 2.1e-17 | 63.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_289.1_30566.t1 | gi|676421924|ref|XP_009043887.1| | hypothetical protein LOTGIDRAFT_102627 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_289.1_30566.t1 | gi|548460519|ref|XP_005678549.1| | PREDICTED: metalloprotease TIKI2-like [Capra hircus] | 0.0 |
| pfu_aug2.0_289.1_30566.t1 | gi|602639306|ref|XP_007426473.1| | PREDICTED: metalloprotease TIKI1-like [Python bivittatus] | 0.0 |
| pfu_aug2.0_289.1_30566.t1 | gi|557268795|ref|XP_006019738.1| | PREDICTED: metalloprotease TIKI1-like isoform X5 [Alligator sinensis] | 0.0 |
| pfu_aug2.0_289.1_30566.t1 | gi|637343288|ref|XP_008116898.1| | PREDICTED: metalloprotease TIKI1 isoform X3 [Anolis carolinensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_289.1_30566.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_289.1_30566.t1 atgccaaacaagggaacaagcccatatcctgacatgccaagcatccacgtcagtgtaaaaggagttcttaccctcttgaa aaacatcaacatcaacaaagctacaggtccagacgcattaccagcaaggctattgcatgattacgcagaacatctagcac caatcttgacctctatatttcaatcatctctagataaaggacggatcccagaggactggcgtcaagcgagcatagtgcct atcttcaagaaaggagacaaacatctagcatctaactatcgaccagtctccctaacatccataacatgtaagctattgga gcatatagtgcatagccaggtaatggatttcctagaccaacaatccattcttcatgacaatcaacacgggttccgatcta agaggtcctgtgaatcacaattggtctacactattaatgagatagcacgaaacctaggggagagaggtcaagtagatatc atcctgcttgacttctcaaaagcttttgataaagttccccaccatcgttttgcacacaaacttggatactatggcatcag aggtagcactctccaatggattagggacttcctcacaaacagaacccaacaagttcttctggaaggacacaagtcatcca ccgcacctgtgctatccggggttccgcaaggaacggtgttaggacctctgctatttctcctctacatcaacgatttgcca gaaaggacaacatcagatgcacgtttgtttgcggacgactgtcttctttatactccagttaagagcagatcagacaccga aacgctgcagaaagacttggattcactcgtcaagtgggaggaggaatggcatatggcttttcatccagaaaagtgggttg tcatccaggttaccaacaaaaggatgcccaccaatgggaactataacatccatggccatttgttagatgtggtggactcc agcaaatacctaggagttaacatcagtaaagatctgcgatgggataaccacatcaacagcataacatccaaggcaaatag gaccctaggattcattagaaggaatatgaggggatgtaggaagcaggcaagggtagcagcctatcaaggtcttgtacgcc cgacacttgaatatgcatgcgcagcatgggacccgtggagctccaagcatatacaccagctggagaaagttcagagaagg gcagcgcgttttgtcacccggaactaccatgatcgtcacccagactgtaatttaattccttggaaggcagatgtattaag ggacggggttaaattgccgttatcattgttaagaacagctgtcaatcaccctatgttagtagagttaaagaatggagaga catataacggacatcttgttagctgtgataactggatgaatattaatctcagagaagttatctgtacgtctagggatggt gatagattttggaggatgccggaatgctacatcagaggcagcacaatcaaatatctccgtatacctgatgaggtcataga catggtgaaagaggaggtcatccagaagtccaaaggtcgtggtgaggtcagaggtcgaggtggacccagaggaggaagag gaggtagaggccacagagatgtttttggggtgcttttggaagtcgaggaggagggcgaggcggtggtcggggaggacagc agaggccgggcaaggggcgtggtgattagtgataccttagatggcggcaaattgtggcgtaacagttccatcgtttttac ttacacaggtcgacacgtggtcatcatgtattttacattctatattggatgtctgtacgtacttctgattctgacgacgt catacactacatcttcaccgttacctaagttcagctgcccaagtcaccaagaacagccctcagaattgaattccttccta tggactttgaagagggagccaccgtcctacttttttgggacaattcacgtgccgtatacccgggtatgggactatatacc tcaaaatacaaaggtcgcgttcgacgaggcggaggaggtcgtgttcgaattggacctgaccaatccttataccatatcag ctctagcggactgccagcttctaccccggggggagaagttagatagcatcctacccccggacctgtatcagagactgaaa cgccacatagagtatgtcaagtccatgctgcccgtgtggatgactccggaccagcggggtaagggactatatgccgacta tctgtttaatgccatagcgggtaactgggagaggaaacgccctgtttgggtaatgcttatggtcaactcactaactgaaa atgacatcaagtcacgtggtattcctgtactggaccttttcttggcccaggaagctgagaaaattgggaaaataaccaat gctgtggagagggtggaagagcagtgtgtgccgctcaatgaactcaacttttctcaggttttgtttgctctgaaccagac gttgtggcagcacgagatttctcgctccatgaagaatgaggcacgctacaccacagaggatcttatacatcactacaact gtggcgacctcaatgccatcatcttcaaccacgacactgcgcaggtccccaacctcgtcaacacgtcacttccgccacag gagatggagaccgcaaaattgatcgacgactatttccgggagcagttgatcagtaagcggaaccagagaatgacggaacg ggttattaatttactgaaagcttatcctcagaggagtttcttctttgctttcggagcaggacatttcctaggcaatggca caatcatagacagacttagaaaggcgggttatcagatagaacacacaagtcccgatgcttacattccagtcacagacaaa agtgagaggaagaagtaccgacggaggaaactgacagataattatagtcggggtaacttctggttccaaatggatccagg atccaggatgtggaatgatgagagaaagagtaagaaggataggaataaacagaggcaaaacaaacctttcaatgatctct ggattaaaatggactcctacaatgctgatctaatggcagagcttgcagagaaatatggttacccagaaagacggaagaac catactaaaccacagcagagtcatcattaccaaccgtactccacagcaaccagtcaccaccaggttaccttcgctgttat cttggttacgttactacaagtgttgttacggtga |
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Protein
| Protein ID | pfu_aug2.0_289.1_30566.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_289.1_30566.t1 MPNKGTSPYPDMPSIHVSVKGVLTLLKNININKATGPDALPARLLHDYAEHLAPILTSIFQSSLDKGRIPEDWRQASIVP IFKKGDKHLASNYRPVSLTSITCKLLEHIVHSQVMDFLDQQSILHDNQHGFRSKRSCESQLVYTINEIARNLGERGQVDI ILLDFSKAFDKVPHHRFAHKLGYYGIRGSTLQWIRDFLTNRTQQVLLEGHKSSTAPVLSGVPQGTVLGPLLFLLYINDLP ERTTSDARLFADDCLLYTPVKSRSDTETLQKDLDSLVKWEEEWHMAFHPEKWVVIQVTNKRMPTNGNYNIHGHLLDVVDS SKYLGVNISKDLRWDNHINSITSKANRTLGFIRRNMRGCRKQARVAAYQGLVRPTLEYACAAWDPWSSKHIHQLEKVQRR AARFVTRNYHDRHPDCNLIPWKADVLRDGVKLPLSLLRTAVNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDG DRFWRMPECYIRGSTIKYLRIPDEVIDMVKEEVIQKSKGRGEVRGRGGPRGGRGGRGHRDVFGVLLEVEEEGEAVVGEDS RGRARGVVISDTLDGGKLWRNSSIVFTYTGRHVVIMYFTFYIGCLYVLLILTTSYTTSSPLPKFSCPSHQEQPSELNSFL WTLKREPPSYFFGTIHVPYTRVWDYIPQNTKVAFDEAEEVVFELDLTNPYTISALADCQLLPRGEKLDSILPPDLYQRLK RHIEYVKSMLPVWMTPDQRGKGLYADYLFNAIAGNWERKRPVWVMLMVNSLTENDIKSRGIPVLDLFLAQEAEKIGKITN AVERVEEQCVPLNELNFSQVLFALNQTLWQHEISRSMKNEARYTTEDLIHHYNCGDLNAIIFNHDTAQVPNLVNTSLPPQ EMETAKLIDDYFREQLISKRNQRMTERVINLLKAYPQRSFFFAFGAGHFLGNGTIIDRLRKAGYQIEHTSPDAYIPVTDK SERKKYRRRKLTDNYSRGNFWFQMDPGSRMWNDERKSKKDRNKQRQNKPFNDLWIKMDSYNADLMAELAEKYGYPERRKN HTKPQQSHHYQPYSTATSHHQVTFAVILVTLLQVLLR |
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