Gene
| Gene Model ID | pfu_aug2.0_289.1_30567 |
|---|---|
| Locus | scaffold289.1 : 145936 ... 153650 : + |
| To GenomeBrowser | scaffold289.1:145936..153650 |
| Genes list of scaffold | scaffold289.1 |
| Synonym | pfu_aug1.0_21858.1_04179 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_289.1_30567.t1 | 2 | 1 | Ofd1_CTDD | 122 | 207 | 1.3e-34 | 119.6 | 2.7e-05 | 0.13 | 11.3 |
| pfu_aug2.0_289.1_30567.t1 | 2 | 1 | 2OG-FeII_Oxy_3 | 153 | 249 | 1.9e-16 | 60.3 | 2.0e-18 | 9.7e-15 | 54.9 |
| pfu_aug2.0_289.1_30567.t1 | 2 | 2 | Ofd1_CTDD | 276 | 460 | 1.3e-34 | 119.6 | 2.0e-34 | 1.0e-30 | 106.8 |
| pfu_aug2.0_289.1_30567.t1 | 2 | 2 | 2OG-FeII_Oxy_3 | 411 | 455 | 1.9e-16 | 60.3 | 0.028 | 140.0 | 3.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_289.1_30567.t1 | gi|524878460|ref|XP_005095916.1| | PREDICTED: 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_289.1_30567.t1 | gi|676463594|ref|XP_009056646.1| | hypothetical protein LOTGIDRAFT_120424, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_289.1_30567.t1 | gi|558173105|ref|XP_006125523.1| | PREDICTED: 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 1 [Pelodiscus sinensis] | 0.0 |
| pfu_aug2.0_289.1_30567.t1 | gi|632972790|ref|XP_007902834.1| | PREDICTED: 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 1 [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_289.1_30567.t1 | gi|591352394|ref|XP_007070644.1| | PREDICTED: 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 1 [Chelonia mydas] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_289.1_30567.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_289.1_30567.t1 atgtgtagattgatgcctgtcaaaactgatcaattacacaagttagaggagccatcaaggacaattgtagacttgggata ttttcggagctggaaaaagctctacttatattctgcccatatgatatcaattacccggtatgcagacactgagatacgag ggctttcaaaagataccagtacaaacatccagctgacccagaagccattctgtcattgtgtcatacctaacatcattaag gaccaggattttgtagaccggttacaggaggaaattctagatctgacattttcagagaaaaataatgatctgtacaagtt tcatcagagtttagaagacctaaaagtgatagagtcaccattaataagcaggttaaggtcattcatatataaagatttac tgaagtggattcaagaggtaacagggataaaactgaacaataatgtggatatgtcatgtgcatcatacaggtatacagat atattactgtgtcatgatgatgagttggatgacaggagggtagcgtttatttattatcttgtacctaaatcctggagaga ggaggatggaggatctctagatttgttctgtgtagatagtaaaggagaaccaagggagatagtgaaatccatccatccaa aacggaacacatttgtcttttttgaagtcggaccaacttcatttcaccaagtatcagagattttaacagaggacaagaca cggctgtccgtcagtggatggttccatggtccacctgtctacagacccccagcctatgtcgagatccctccttcaccgca gccattcatgtctattgaggaagaggagttttattcctggataaatcccctgtacctggatcctgagacacaggctgaga tcaaggatacttttaaggaggagtcacagatagagcttcactgctttctacaggaggataagtatgaggcattgatgaca gctttaaaaagtaaaagtgattcacattggaagaaacaaggacctgctcataaaagacattattggagtcttgataacga gagcccagacattgtacaatcctgtgtaaggttcctgcagtcagatgccatgttcctggtactatctagtctaaccggtc tccggctacatgaactcgctcaagtctctgattacgatgattcggatgatgagtgtgataataaaaaagacacaaagggt caggcaatgtgtcggtcagtggtcaggagatggacacacgggtgttacactctggttcatgactcggatattgagtctgg gagctgggctcttgatgctgtactatttatagattgtgatgattggaaaccagagtatggaggtgtgacatcgtacattg ccaaaggtgaaaaagaagaggtaatgtatgttcaaatgtattgtggaatattaaaagttagaattgaaaaattctttaaa aaaaacccaacaaaatggaacaagttatattga |
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Protein
| Protein ID | pfu_aug2.0_289.1_30567.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_289.1_30567.t1 MCRLMPVKTDQLHKLEEPSRTIVDLGYFRSWKKLYLYSAHMISITRYADTEIRGLSKDTSTNIQLTQKPFCHCVIPNIIK DQDFVDRLQEEILDLTFSEKNNDLYKFHQSLEDLKVIESPLISRLRSFIYKDLLKWIQEVTGIKLNNNVDMSCASYRYTD ILLCHDDELDDRRVAFIYYLVPKSWREEDGGSLDLFCVDSKGEPREIVKSIHPKRNTFVFFEVGPTSFHQVSEILTEDKT RLSVSGWFHGPPVYRPPAYVEIPPSPQPFMSIEEEEFYSWINPLYLDPETQAEIKDTFKEESQIELHCFLQEDKYEALMT ALKSKSDSHWKKQGPAHKRHYWSLDNESPDIVQSCVRFLQSDAMFLVLSSLTGLRLHELAQVSDYDDSDDECDNKKDTKG QAMCRSVVRRWTHGCYTLVHDSDIESGSWALDAVLFIDCDDWKPEYGGVTSYIAKGEKEEVMYVQMYCGILKVRIEKFFK KNPTKWNKLY |
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