Gene
| Gene Model ID | pfu_aug2.0_289.1_30572 |
|---|---|
| Locus | scaffold289.1 : 246665 ... 253387 : + |
| To GenomeBrowser | scaffold289.1:246665..253387 |
| Genes list of scaffold | scaffold289.1 |
| Synonym | pfu_aug1.0_19207.1_40133 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_289.1_30572.t1 | 2 | 1 | 7TM_GPCR_Srw | 55 | 352 | 1.7e-27 | 96.4 | 1.2e-28 | 3.5e-25 | 88.8 |
| pfu_aug2.0_289.1_30572.t1 | 3 | 1 | 7tm_1 | 64 | 343 | 3.1e-18 | 65.8 | 1.1e-21 | 3.1e-18 | 65.8 |
| pfu_aug2.0_289.1_30572.t1 | 3 | 2 | 7tm_1 | 324 | 384 | 3.1e-18 | 65.8 | 0.1 | 300.0 | 0.3 |
| pfu_aug2.0_289.1_30572.t1 | 2 | 2 | 7TM_GPCR_Srw | 330 | 400 | 1.7e-27 | 96.4 | 1.5e-05 | 0.045 | 12.8 |
| pfu_aug2.0_289.1_30572.t1 | 3 | 3 | 7tm_1 | 360 | 392 | 3.1e-18 | 65.8 | 0.1 | 300.0 | 0.3 |
Transcript
| Transcript ID | pfu_aug2.0_289.1_30572.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_289.1_30572.t1 atggacggtggcgatacatacgacgatgaaatgagtaccttccgaggattcaacgccacgaatggatctctgtataatga aatagatatgccacatctgttacacatcggcggtatttacccgttgaaatatgcagtgccgataaacggctacttgtcgc cgttattgattttcatcacgctcgtaactaacatctttgtggtagtagtgttgatgcgaaaacacatgcgctcaccaacg aacgcgattcttgccggaatggcggtatccgacatgtttactgggctatctccgcttccggttttcctatacctattttc catgggaaattacaaggatttcgtggaatataaatggtgctacgtatattttgcactcggtgaatggattcctaccatat tccacactgcttcgatctggctaaccatgacgttggcgatccaacgctacatctatatctgtcattcaatccaggcgaga aaatggtgcactatacaaaatgtcgtaataggaaccgctgtcatctatcttgtcgcaattctgtcgcaatgttcacgatt tgccgactacgggctatatcctgtagaaattccctccgtcgtttacccgaacaaaacgatacttgcttgcgaaatgagat tgcggccttggttcagagagaacgaggtcctgtactttaatatatatttctggttccgggttatattcattcacctggta ccgtgcacgtttctcgttttattgaatgccttacttatttcgaccatgcgcactgcgcagttacgacgaatgcagcttct gcaacagaacaagaaaagcgagtctaagaaactaaaggacagtaactgcactaccttgatgctggtagcagttgtcggac ttttcttactcgttgaatttccgctcggtattattatgatcctaaacatcatacagaattcatttgctgtacaaatctgt tcagaagaaacgtttagatcgatgacgttgatatcaaatttcttcattctactctcctatccgctcaacttctttattta ctgtggtatgagcaggcnnnnnnnnnnnnnnnnnnaagaaacgtttagatcgatgacgttgatatcaaatttcttcattc tactctcctatccgctcaacttctttatttactgtggtatgagcaggcagtttcgggaaacgtttaaacacatgtttaca ggtggcccaatctcattggacagagaatgttctcaatacactgctatcccaacagaaaacggaaaaacatgtacaacagg cggaggcgaaactgctctgtaa |
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Protein
| Protein ID | pfu_aug2.0_289.1_30572.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_289.1_30572.t1 MDGGDTYDDEMSTFRGFNATNGSLYNEIDMPHLLHIGGIYPLKYAVPINGYLSPLLIFITLVTNIFVVVVLMRKHMRSPT NAILAGMAVSDMFTGLSPLPVFLYLFSMGNYKDFVEYKWCYVYFALGEWIPTIFHTASIWLTMTLAIQRYIYICHSIQAR KWCTIQNVVIGTAVIYLVAILSQCSRFADYGLYPVEIPSVVYPNKTILACEMRLRPWFRENEVLYFNIYFWFRVIFIHLV PCTFLVLLNALLISTMRTAQLRRMQLLQQNKKSESKKLKDSNCTTLMLVAVVGLFLLVEFPLGIIMILNIIQNSFAVQIC SEETFRSMTLISNFFILLSYPLNFFIYCGMSRXXXXXXXETFRSMTLISNFFILLSYPLNFFIYCGMSRQFRETFKHMFT GGPISLDRECSQYTAIPTENGKTCTTGGGETAL |
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