Gene
| Gene Model ID | pfu_aug2.0_289.1_30573 |
|---|---|
| Locus | scaffold289.1 : 290496 ... 296844 : - |
| To GenomeBrowser | scaffold289.1:290496..296844 |
| Genes list of scaffold | scaffold289.1 |
| Synonym | pfu_aug1.0_9454.1_46039 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_289.1_30573.t1 | 3 | 1 | Ig_3 | 28 | 123 | 7.9e-16 | 58.3 | 4.8e-08 | 0.00012 | 22.5 |
| pfu_aug2.0_289.1_30573.t1 | 3 | 1 | I-set | 38 | 123 | 1.7e-24 | 85.5 | 6.2e-07 | 0.0015 | 18.3 |
| pfu_aug2.0_289.1_30573.t1 | 3 | 1 | Ig_2 | 40 | 125 | 1.3e-18 | 66.9 | 2.7e-07 | 0.00066 | 19.7 |
| pfu_aug2.0_289.1_30573.t1 | 3 | 1 | V-set | 40 | 125 | 1.9e-17 | 63.1 | 2.2e-11 | 5.6e-08 | 32.6 |
| pfu_aug2.0_289.1_30573.t1 | 3 | 1 | ig | 41 | 122 | 6.0e-17 | 61.5 | 4.5e-07 | 0.0011 | 19.0 |
| pfu_aug2.0_289.1_30573.t1 | 3 | 2 | I-set | 163 | 225 | 1.7e-24 | 85.5 | 3.2e-11 | 8.0e-08 | 32.0 |
| pfu_aug2.0_289.1_30573.t1 | 3 | 2 | V-set | 163 | 224 | 1.9e-17 | 63.1 | 8.8e-07 | 0.0022 | 17.8 |
| pfu_aug2.0_289.1_30573.t1 | 3 | 2 | Ig_3 | 166 | 223 | 7.9e-16 | 58.3 | 1.2e-09 | 3.1e-06 | 27.5 |
| pfu_aug2.0_289.1_30573.t1 | 3 | 2 | Ig_2 | 169 | 224 | 1.3e-18 | 66.9 | 2.1e-08 | 5.3e-05 | 23.2 |
| pfu_aug2.0_289.1_30573.t1 | 3 | 2 | ig | 170 | 220 | 6.0e-17 | 61.5 | 9.5e-11 | 2.3e-07 | 30.8 |
| pfu_aug2.0_289.1_30573.t1 | 3 | 3 | I-set | 259 | 339 | 1.7e-24 | 85.5 | 4.7e-11 | 1.2e-07 | 31.5 |
| pfu_aug2.0_289.1_30573.t1 | 3 | 3 | Ig_2 | 267 | 345 | 1.3e-18 | 66.9 | 2.5e-07 | 0.00061 | 19.8 |
| pfu_aug2.0_289.1_30573.t1 | 3 | 3 | Ig_3 | 267 | 333 | 7.9e-16 | 58.3 | 0.016 | 39.0 | 4.8 |
| pfu_aug2.0_289.1_30573.t1 | 3 | 3 | V-set | 274 | 339 | 1.9e-17 | 63.1 | 9.8e-05 | 0.24 | 11.2 |
| pfu_aug2.0_289.1_30573.t1 | 3 | 3 | ig | 276 | 332 | 6.0e-17 | 61.5 | 0.00044 | 1.1 | 9.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_289.1_30573.t1 | gi|340710324|ref|XP_003393742.1| | 2.0e-20 | |
| pfu_aug2.0_289.1_30573.t1 | gi|350423559|ref|XP_003493519.1| | 2.0e-20 | |
| pfu_aug2.0_289.1_30573.t1 | gi|571514539|ref|XP_006568837.1| | PREDICTED: lachesin-like isoform X2 [Apis mellifera] | 1.0e-19 |
| pfu_aug2.0_289.1_30573.t1 | gi|571514536|ref|XP_001120980.3| | PREDICTED: lachesin-like isoform X1 [Apis mellifera] | 1.0e-19 |
Transcript
| Transcript ID | pfu_aug2.0_289.1_30573.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_289.1_30573.t1 atgtctacatgggaaggattccgtacacttttatttctcctcgtgacagcagtgagttgtcaagatgcccagaaaaaccc cgaaataatttctcctttggaaatcaagagtgataaaataggaggcgaggcaacgttacggtgtaactatagaaacaagt gggactcctcacaggtccaatggattaaaattaaccccagaaagccacttattctgagccttggaagcagagccgtggtg gaaatagaaaccaaatacccgggaaaatatcaaatacaggaaagcacagatgaggatgtttatatctcagtactaactat tagggacttggtaaaatcagactcgggacggtatagatgtgtagtaagaacccgggaaattctctcgccgaagttttggg cgaaaaaagagggtcttctagatatattagagcctcccgtcattacaacccttgtatcaaatgtcggtctagcaaatcag agaatattggtcggacccgatgttgatgttacaatatcctgttccgctgccggtaaaccggaaccgtcagtgcaatggtg gagaactgatcgcatttccggtagagtgaaaatggagaagggcgacgagttacgtttcgataatttaacattagtagaca ccggaacttatatgtgcattgcaaaaaacggaatcgaaccgtttgcaaatatgtccgtttttgttggaatgaagaccgag gaactaaaatgctctaaaccaacactggacgtagctaactgcattaatccactagacgaaaaattggaaatagactttca aattgaaggttttcctttaagcactgtaaagtggtacaaagattctgtcgaggtggcaaaaataatgcccgggacggaat cggattcaaattcccgcctaaatcttgctgagagggaatctcaggaatttgattggaacacacatttctacagattgact gtgtataacgtcaccgcagaggacgccggaagttaccattacactgcttcaaataaggacatctcctgtatatcgtactt gaatttgacagatatctgcccggataccggaagcctaaaaccagatccagggaatgctgggaaatcagtagttgcgtcat ctcccataaatatttttgccgttatagccttctttgcatttctgcagcagtaa |
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Protein
| Protein ID | pfu_aug2.0_289.1_30573.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_289.1_30573.t1 MSTWEGFRTLLFLLVTAVSCQDAQKNPEIISPLEIKSDKIGGEATLRCNYRNKWDSSQVQWIKINPRKPLILSLGSRAVV EIETKYPGKYQIQESTDEDVYISVLTIRDLVKSDSGRYRCVVRTREILSPKFWAKKEGLLDILEPPVITTLVSNVGLANQ RILVGPDVDVTISCSAAGKPEPSVQWWRTDRISGRVKMEKGDELRFDNLTLVDTGTYMCIAKNGIEPFANMSVFVGMKTE ELKCSKPTLDVANCINPLDEKLEIDFQIEGFPLSTVKWYKDSVEVAKIMPGTESDSNSRLNLAERESQEFDWNTHFYRLT VYNVTAEDAGSYHYTASNKDISCISYLNLTDICPDTGSLKPDPGNAGKSVVASSPINIFAVIAFFAFLQQ |
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