Gene
| Gene Model ID | pfu_aug2.0_2890.1_02285 |
|---|---|
| Locus | scaffold2890.1 : 49772 ... 69045 : - |
| To GenomeBrowser | scaffold2890.1:49772..69045 |
| Genes list of scaffold | scaffold2890.1 |
| Synonym | pfu_aug1.0_55345.1_05575 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2890.1_02285.t1 | 1 | 1 | Methyltransf_11 | 36 | 135 | 3.0e-10 | 40.4 | 2.8e-13 | 6.9e-10 | 39.2 |
| pfu_aug2.0_2890.1_02285.t1 | 2 | 1 | Methyltransf_12 | 36 | 133 | 1.7e-07 | 31.6 | 2.7e-10 | 6.7e-07 | 29.7 |
| pfu_aug2.0_2890.1_02285.t1 | 2 | 2 | Methyltransf_12 | 497 | 514 | 1.7e-07 | 31.6 | 3.8 | 9400.0 | -2.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2890.1_02285.t1 | gi|524870513|ref|XP_005092041.1| | PREDICTED: F-box/LRR-repeat protein 4-like isoform X2 [Aplysia californica] | 2.0e-29 |
| pfu_aug2.0_2890.1_02285.t1 | gi|524870511|ref|XP_005092040.1| | PREDICTED: F-box/LRR-repeat protein 4-like isoform X1 [Aplysia californica] | 2.0e-29 |
| pfu_aug2.0_2890.1_02285.t1 | gi|754342617|ref|XP_004366053.2| | hypothetical protein CAOG_01182 [Capsaspora owczarzaki ATCC 30864] | 3.0e-20 |
Transcript
| Transcript ID | pfu_aug2.0_2890.1_02285.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2890.1_02285.t1 atgtctagtgcaatagcaactatgaacaactgtggatatcagatggcgacaccaagccccctcttacaggactggttatc atcttatgatgaccagcatcctttactagacataggatgtgcatatggtataaatacctttaaggcactggagctcggca ttcctacagttagcatggatccagaggagaaacacctagttatcctccgtcaaaatatggataaagaatatcgccatttg tcgacatgtgttatcggagagcttccatacagcattcccttttccgataatcatttttccggaattctttgtgccgaagt gttccattttctagatggaaagagcatagaaaaatccatagatatcatttacagaaaacttgttccaaacggaaaatttg ttatgacaatgacgtccgacaaactgcttgaatatatagataaggacatgcatactaaattccaggataatcttgagaat ggcagcaaatggccaggagaggtgccttgggatgctgaatttacagtgaaatacaaacgtattataaaaaacgatgcaat cagatctgaaatccactatgtttctggaaatattcttcatttctgctccgtagaacaaataacagaggtgctacaacacc ggggatttggaattctgcatgcaaacgttggtgaacaccctggacatcaggatcctatgggtctggatgaagtctattct tcacaagttagtttatgggttagcagtgttgaggcttattcttcacagtgggatgataaagattatgctgcgaatgaagt tattggaataccaaatgtatatcctggctacggtgacttaaagggagcatgggcccagaaatcgctcaatgagaacgaat atatacaggtacgatttgaatacgagatttacatagaggaagtgaatatatatgaaacatacaactgtggaggagtatgg aaggtagagataatgacggtacaaggttgggtaacagtgtgggagatcccttcctcgcaagtacagcaactcacagacag caggatattttcaccagatattatatttgttcaacatccctcgaatatggttaaattgactgttaactgtgcacatgcta attcatgggtagaaattgatgcaattcaaattactggaagcattgatttaacagtaactacggaggaagctaccagcacc gttatcacccaggagacaacgaaaacaactgatcaagatactacaataggtactaccgatcaaacaactgagttaacctc agtctctacgcaaactgcttcatcaacagaaccgtcaacagtacaagaatataattgttgttgtacatataccaacaata tcactaaagagaccctatctttgagattagaagaaataagacgtgctttatccgtacccagaaaccttactggaaggtat aacaggagcaagcttagtgcagatgacgatagacctagttccatcgcccttggaacgtctgttggcatagtaaccatggt gctgttagccagtcttatcattgcttgtgacattaagtttatttatagcgggaatcgtcgctaa |
|
Protein
| Protein ID | pfu_aug2.0_2890.1_02285.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2890.1_02285.t1 MSSAIATMNNCGYQMATPSPLLQDWLSSYDDQHPLLDIGCAYGINTFKALELGIPTVSMDPEEKHLVILRQNMDKEYRHL STCVIGELPYSIPFSDNHFSGILCAEVFHFLDGKSIEKSIDIIYRKLVPNGKFVMTMTSDKLLEYIDKDMHTKFQDNLEN GSKWPGEVPWDAEFTVKYKRIIKNDAIRSEIHYVSGNILHFCSVEQITEVLQHRGFGILHANVGEHPGHQDPMGLDEVYS SQVSLWVSSVEAYSSQWDDKDYAANEVIGIPNVYPGYGDLKGAWAQKSLNENEYIQVRFEYEIYIEEVNIYETYNCGGVW KVEIMTVQGWVTVWEIPSSQVQQLTDSRIFSPDIIFVQHPSNMVKLTVNCAHANSWVEIDAIQITGSIDLTVTTEEATST VITQETTKTTDQDTTIGTTDQTTELTSVSTQTASSTEPSTVQEYNCCCTYTNNITKETLSLRLEEIRRALSVPRNLTGRY NRSKLSADDDRPSSIALGTSVGIVTMVLLASLIIACDIKFIYSGNRR |
|