Gene
| Gene Model ID | pfu_aug2.0_290.1_00553 |
|---|---|
| Locus | scaffold290.1 : 137406 ... 158215 : - |
| To GenomeBrowser | scaffold290.1:137406..158215 |
| Genes list of scaffold | scaffold290.1 |
| Synonym | pfu_aug1.0_507.1_36564 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| retinal dehydrogenase 1-like | GO:0016620 GO:0055114 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_290.1_00553.t1 | 1 | 1 | Aldedh | 25 | 486 | 0.0 | 621.3 | 0.0 | 0.0 | 621.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_290.1_00553.t1 | gi|676472951|ref|XP_009059657.1| | hypothetical protein LOTGIDRAFT_192810 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_290.1_00553.t1 | gi|291234107|ref|XP_002736989.1| | PREDICTED: retinal dehydrogenase 1-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_290.1_00553.t1 | gi|291222393|ref|XP_002731204.1| | PREDICTED: retinal dehydrogenase 1-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_290.1_00553.t1 | gi|676491432|ref|XP_009065590.1| | hypothetical protein LOTGIDRAFT_207312 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_290.1_00553.t1 | gi|291221651|ref|XP_002730825.1| | PREDICTED: aldehyde dehydrogenase X, mitochondrial-like [Saccoglossus kowalevskii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_290.1_00553.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_290.1_00553.t1 atggcaggaataccgccccctatccgtgagccagaacttaaatacactcagattttcattaagaatgagtttgttaactc tgtcagtggtaaaactttcccaacagttaatcctgccaatgcatcgaagatctgtgatgtacaagaaggagataaggcag atattgatatagccgtagcggctgccaaggaagcattcaaaattgggtcaaaatggagaacgatggatgccagcaagaga gggtcactcctccttaagttggcagacttaatagaaagagatgctcaacaactggcgagtctggagacattggacaatgg caaaccttacatgacagcgttctttgaggttttgttctcagctggagtggtacgttattacgctggatgggcagacaaag tccatggtaaaactatccctgtggatggtgattattggtgctttaccaaacatgagccagtgggagtatgtggacagatt ataccatggaattatcctgtccctatgtttgtatggaagattgccccagcactagcagctggctgtactttagtggtcaa accagctgaacagaccccactaacagcactgtactgtgcttctctgtgtaaggaggcaggtataccatctggtgtgctta acgtggttccaggctacggacctacagctggagctgcactcacagggcatgcagacataaacaaagtggcatttactgga tctactgagataggtcagttgatccttcaggcggcaggtcagtctaacctgaagagaaccactttagaactgggaggaaa gtcacctaacgtcatatttgcggactgtgatttggattcagccgtgaaggaagcccaggaaggtgtgatggtcaatgctg gtcagtgctgtgtggccggcagtcgtacgtttgtccaggaggagatctatgataagtttatcgaggccaccaaaaaactg gcagagcagaggaaggttggggacccgtatgatttacagacatattatggtcctcagattgatgaggagcagtttaacaa gatcatggatctgatccaggcagggcagaaagagggggccaggctggtgacaggaggaggcagacttggtgaccagggat acttcatcaaacccaccgtgtttgctgatgtcaaagacaacatgagaatagcaaaagaagagatttttggtccagttcag aacatcatcaagtttaagaccatggaggaggtcattgagagagctaacgatactacgtatggtttaggtgctgctgtctt cactaatgatctaaacaaggctatgacctttgctcaggccgtacaggctggaagtgtctggataaactgctacaatgttg taagaatccaggctccttttggaggtttcaaaatgtctggcattggcagagaattgggagaatatggaatccaaaactat ttagaagtgaaaaatatctgcatgaaaattccacagaagaattcatag |
|
Protein
| Protein ID | pfu_aug2.0_290.1_00553.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_290.1_00553.t1 MAGIPPPIREPELKYTQIFIKNEFVNSVSGKTFPTVNPANASKICDVQEGDKADIDIAVAAAKEAFKIGSKWRTMDASKR GSLLLKLADLIERDAQQLASLETLDNGKPYMTAFFEVLFSAGVVRYYAGWADKVHGKTIPVDGDYWCFTKHEPVGVCGQI IPWNYPVPMFVWKIAPALAAGCTLVVKPAEQTPLTALYCASLCKEAGIPSGVLNVVPGYGPTAGAALTGHADINKVAFTG STEIGQLILQAAGQSNLKRTTLELGGKSPNVIFADCDLDSAVKEAQEGVMVNAGQCCVAGSRTFVQEEIYDKFIEATKKL AEQRKVGDPYDLQTYYGPQIDEEQFNKIMDLIQAGQKEGARLVTGGGRLGDQGYFIKPTVFADVKDNMRIAKEEIFGPVQ NIIKFKTMEEVIERANDTTYGLGAAVFTNDLNKAMTFAQAVQAGSVWINCYNVVRIQAPFGGFKMSGIGRELGEYGIQNY LEVKNICMKIPQKNS |
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