Gene
| Gene Model ID | pfu_aug2.0_290.1_00556 |
|---|---|
| Locus | scaffold290.1 : 272017 ... 282835 : + |
| To GenomeBrowser | scaffold290.1:272017..282835 |
| Genes list of scaffold | scaffold290.1 |
| Synonym | pfu_aug1.0_28598.1_47896 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| acetylcholine receptor subunit alpha-type acr-16-like precursor | GO:0005230 GO:0006812 GO:0016021 GO:0034220 GO:0044459 GO:0045202 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_290.1_00556.t1 | 2 | 1 | Neur_chan_LBD | 31 | 217 | 0.0 | 162.1 | 0.0 | 0.0 | 158.8 |
| pfu_aug2.0_290.1_00556.t1 | 1 | 1 | Neur_chan_memb | 224 | 367 | 7.9e-31 | 107.7 | 1.4e-34 | 1.1e-30 | 107.3 |
| pfu_aug2.0_290.1_00556.t1 | 2 | 2 | Neur_chan_LBD | 363 | 396 | 0.0 | 162.1 | 0.44 | 3200.0 | -3.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_290.1_00556.t1 | gi|676422626|ref|XP_009043979.1| | hypothetical protein LOTGIDRAFT_52481, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_290.1_00556.t1 | gi|676422629|ref|XP_009043980.1| | hypothetical protein LOTGIDRAFT_102597, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_290.1_00556.t1 | gi|676422644|ref|XP_009043985.1| | hypothetical protein LOTGIDRAFT_52159, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_290.1_00556.t1 | gi|312075136|ref|XP_003140283.1| | hypothetical protein LOAG_04698 [Loa loa] | 0.0 |
| pfu_aug2.0_290.1_00556.t1 | gi|676422638|ref|XP_009043983.1| | hypothetical protein LOTGIDRAFT_152289 [Lottia gigantea] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_290.1_00556.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_290.1_00556.t1 atggtgcgcgaactcgagacctgctcaacagtaccatcgtttggaaagagtactcacacggacgaacaagcacttctgaa agagctgggcttgttcaatcggcaaatatacgacaacagtgtccgccctgtatataactcgtcggatagtgtggtcatct acttcgagttttcgctcacacagatcatggatatgaaatggacggatgatagaatcaagtggaacatcaccatgtataat ggactaaagaaaattaggattccagccagtcttctatggcttccagatattgtactctacaacaatgcagatgactatac ctcaggatttatgcctatcaacgccatggtggagtatgacggatctatattttggtcaccgccatcacgactaagaagcg cttgtaaagtggacataacctactttccttttgatagtcaatactgtcagatgaaatttggttcctggacgtacgacaaa gcacaagtagatctagtcccttcaagtgatattgttgatgttggagactacactacaaatggcgagtggatgctgaagaa atacacaatccacagagaggaaaccaaatatccagcaagcacggaaatatatagcgatatcaaagtgactttgatcatcc agaggcgcatcttgtattatgtattgaacataatttttccttgcttttggctaaacgttttgagcgtgttgactttctgt ttaccgccggatgctggggagaagatcacacttagtatcactgtcttattatcttactcagtgttcatgctgcttgtagc tgaaagtatgccacccacatcggagtttgttcctcttattggtatttatctaacagtgtccatggcgtcagcgtcggtat ctgtggttctcaccgtgctggtgttgaagctccatcactgctcaccgaaacagactagagtaccgggtattattagggta gccgtcttagggatactggctaaactcgtccgctgtagctgtaaaggaggggtcaaaagtataaaacgtgtgtacaaaac acgtggtgaacaacggaacaaaggtcaaggtgacagtgactctgtgactacagtgatggaatcacaacttgtctccaaat tccaacactcaacattaaagaacgatacatgcgataccaatgtgcatttgatcacaacctacagggactccctgaacaca gacgagacaatatctttactggaaggagataaaccttgtcctgcaatgtcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaagggagtataagccatccacgctggataccatccttaaatacatca aaacgatcgtga |
|
Protein
| Protein ID | pfu_aug2.0_290.1_00556.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_290.1_00556.t1 MVRELETCSTVPSFGKSTHTDEQALLKELGLFNRQIYDNSVRPVYNSSDSVVIYFEFSLTQIMDMKWTDDRIKWNITMYN GLKKIRIPASLLWLPDIVLYNNADDYTSGFMPINAMVEYDGSIFWSPPSRLRSACKVDITYFPFDSQYCQMKFGSWTYDK AQVDLVPSSDIVDVGDYTTNGEWMLKKYTIHREETKYPASTEIYSDIKVTLIIQRRILYYVLNIIFPCFWLNVLSVLTFC LPPDAGEKITLSITVLLSYSVFMLLVAESMPPTSEFVPLIGIYLTVSMASASVSVVLTVLVLKLHHCSPKQTRVPGIIRV AVLGILAKLVRCSCKGGVKSIKRVYKTRGEQRNKGQGDSDSVTTVMESQLVSKFQHSTLKNDTCDTNVHLITTYRDSLNT DETISLLEGDKPCPAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSISHPRWIPSLNTS KRS |
|