Gene
| Gene Model ID | pfu_aug2.0_290.1_00557 |
|---|---|
| Locus | scaffold290.1 : 312807 ... 347587 : + |
| To GenomeBrowser | scaffold290.1:312807..347587 |
| Genes list of scaffold | scaffold290.1 |
| Synonym | pfu_aug1.0_161.1_43519 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| acetylcholine receptor subunit alpha-type acr-16-like precursor | GO:0004889 GO:0016021 GO:0030054 GO:0045211 GO:0098655 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_290.1_00557.t1 | 1 | 1 | Neur_chan_LBD | 29 | 235 | 0.0 | 228.4 | 0.0 | 0.0 | 228.0 |
| pfu_aug2.0_290.1_00557.t1 | 1 | 1 | Neur_chan_memb | 242 | 367 | 2.7e-39 | 135.4 | 4.90454e-43 | 3.7e-39 | 135.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_290.1_00557.t1 | gi|526117451|ref|NP_001267772.1| | acetylcholine receptor subunit alpha-type acr-16-like precursor [Aplysia californica] | 0.0 |
| pfu_aug2.0_290.1_00557.t1 | gi|676422641|ref|XP_009043984.1| | hypothetical protein LOTGIDRAFT_152290 [Lottia gigantea] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_290.1_00557.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_290.1_00557.t1 atgaattcttggatagtgcgcttctttcccttgttatcatcgatgattttctcagcagccaaattgtcgcggattattcc tgatgaacagcgtcttctagagacaattcttctcgactacaatacggcggccagacctgtatacaatgcttcccgtattg tttctgttttgtttggatttactttaactcagatagctgatatggatgaggtgaatcaggtgttgactaccaatgtgtgg cttgaacaggagtggtttgacgagagactgatatggaatcctaaagattataatggactagaaaccattcgcattccatg tgacaaaatatggcttcctgacgtcgtgttatacaacagcgctgatgattttacagcgggctacatgcaaagcaaagcaa tggttcggtacgatggcaatgtattttggccaccccctgcaaagttcagaagttcctgtacgatagacataacgtatttt cccttcgatgatcagatctgcaaaatgaaatttggttcatggacttatgacggcacccaagttgatttggtgaaccgatc aaccttcgtcgatctgtcaaactacgtgtacagtggcgaatgggaacttttagacattcgtgtgataagaaacgaagtat tttacgcatgctgtgatatcccctaccctgatgtgacattcaccattgtcatgcgcaggaagaccttatattaccttttc aatatcatatttccttgcctatggctaaccatcctcagcttactgggattctggcttcctccagacagcggagagaagat aactcttggtatcacggtattactggcgttctccgtatttatgctccttattgctgaaaatatgcctgctacgtcagagt ttgttccccttattggtatatatctgacggtcaccatgggtatgacatccttgtccattattttaactgtgtttgtcctt caaattcatcatgtcggtccacatcaaagaccggtcccccgctggttaaggtttctttgttttaaaattctcgccaggat gatgtgcatgaaagttcctgcaatacctcagctttataaaaactatttccaaaatgaagacatgtgtctgacgtcatttg tagaaacagttgataccggaacaggaaattgtaatgtaacctcaaaacaacccgaaaacacaaaagcaatctag |
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Protein
| Protein ID | pfu_aug2.0_290.1_00557.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_290.1_00557.t1 MNSWIVRFFPLLSSMIFSAAKLSRIIPDEQRLLETILLDYNTAARPVYNASRIVSVLFGFTLTQIADMDEVNQVLTTNVW LEQEWFDERLIWNPKDYNGLETIRIPCDKIWLPDVVLYNSADDFTAGYMQSKAMVRYDGNVFWPPPAKFRSSCTIDITYF PFDDQICKMKFGSWTYDGTQVDLVNRSTFVDLSNYVYSGEWELLDIRVIRNEVFYACCDIPYPDVTFTIVMRRKTLYYLF NIIFPCLWLTILSLLGFWLPPDSGEKITLGITVLLAFSVFMLLIAENMPATSEFVPLIGIYLTVTMGMTSLSIILTVFVL QIHHVGPHQRPVPRWLRFLCFKILARMMCMKVPAIPQLYKNYFQNEDMCLTSFVETVDTGTGNCNVTSKQPENTKAI |
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