Gene
| Gene Model ID | pfu_aug2.0_2903.1_12311 |
|---|---|
| Locus | scaffold2903.1 : 45376 ... 51906 : + |
| To GenomeBrowser | scaffold2903.1:45376..51906 |
| Genes list of scaffold | scaffold2903.1 |
| Synonym | pfu_aug1.0_204570.1_06864 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| nucleoside diphosphate kinase 6-like | GO:0000166 GO:0009209 GO:0009220 GO:0016301 GO:0016310 GO:0046132 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2903.1_12311.t1 | 2 | 1 | NDK | 36 | 171 | 7.5e-36 | 122.8 | 1.2e-39 | 1.8e-35 | 121.6 |
| pfu_aug2.0_2903.1_12311.t1 | 2 | 2 | NDK | 188 | 204 | 7.5e-36 | 122.8 | 0.18 | 2700.0 | -2.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2903.1_12311.t1 | gi|676439193|ref|XP_009048777.1| | hypothetical protein LOTGIDRAFT_112601 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_2903.1_12311.t1 | gi|524910280|ref|XP_005110021.1| | PREDICTED: nucleoside diphosphate kinase 6-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_2903.1_12311.t1 | gi|658912126|ref|XP_008396119.1| | PREDICTED: nucleoside diphosphate kinase 6 [Poecilia reticulata] | 0.0 |
| pfu_aug2.0_2903.1_12311.t1 | gi|617403057|ref|XP_007552979.1| | PREDICTED: nucleoside diphosphate kinase 6 [Poecilia formosa] | 0.0 |
| pfu_aug2.0_2903.1_12311.t1 | gi|390336584|ref|XP_788352.3| | PREDICTED: nucleoside diphosphate kinase 6 [Strongylocentrotus purpuratus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_2903.1_12311.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2903.1_12311.t1 atgaatctccaagcggcgccccccaagtggcatcctgacacccccgaagtccaggctgaacaacctgaacgtactgttga tagaaaattccaacataaacggttaacattggcacttctcaagcctgatgtggcaggaagacctcatatagtggaggaga tacgacgcatggtccttaatgatggattcttctttgtcagatcaaagcatctctatctaccacgatcaaaggcagaggaa ttttataaggaacacgagggacggttctttcataatcgcttagtgtcctttatgtcaagtgggcacctgtggtcacacat tctggcccgtgatgatgctataggagcctggagaagactcatggggcccacaaaggtttttcagacaatgcatcaccacc ctgaaaccatcaggggccgttatggtctgacagacaccaggaatgccactcacggctctgactctgaggaaactgcaaaa cgagaaatcagcttcttttttccagagtttgacgttgatgaatggtataaaaaggaagaagtttactttaggcaagggag tgtcaaatattgtgaagagaattttgttcataaaccttcatgtaatgaaacctccgagttttctaaagtatga |
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Protein
| Protein ID | pfu_aug2.0_2903.1_12311.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2903.1_12311.t1 MNLQAAPPKWHPDTPEVQAEQPERTVDRKFQHKRLTLALLKPDVAGRPHIVEEIRRMVLNDGFFFVRSKHLYLPRSKAEE FYKEHEGRFFHNRLVSFMSSGHLWSHILARDDAIGAWRRLMGPTKVFQTMHHHPETIRGRYGLTDTRNATHGSDSEETAK REISFFFPEFDVDEWYKKEEVYFRQGSVKYCEENFVHKPSCNETSEFSKV |
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