Gene
| Gene Model ID | pfu_aug2.0_2905.1_18964 |
|---|---|
| Locus | scaffold2905.1 : 2083 ... 17075 : - |
| To GenomeBrowser | scaffold2905.1:2083..17075 |
| Genes list of scaffold | scaffold2905.1 |
| Synonym | pfu_aug1.0_2418.1_58905 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| delta-like protein 1 | GO:0003002 GO:0007154 GO:0007507 GO:0009790 GO:0035295 GO:0045596 GO:0048514 GO:0048646 GO:0048729 GO:0051241 GO:0051716 GO:0060429 GO:2000026 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2905.1_18964.t1 | 2 | 1 | EGF | 202 | 214 | 2.7e-13 | 49.5 | 2.1e-05 | 0.035 | 14.0 |
| pfu_aug2.0_2905.1_18964.t1 | 2 | 2 | EGF | 224 | 252 | 2.7e-13 | 49.5 | 1.3e-13 | 2.1e-10 | 40.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2905.1_18964.t1 | gi|634875130|ref|XP_007948690.1| | PREDICTED: delta-like protein 1 [Orycteropus afer afer] | 5.0e-10 |
| pfu_aug2.0_2905.1_18964.t1 | gi|731512931|ref|XP_010599639.1| | PREDICTED: LOW QUALITY PROTEIN: delta-like protein 1 [Loxodonta africana] | 6.0e-10 |
| pfu_aug2.0_2905.1_18964.t1 | gi|637333029|ref|XP_008115024.1| | PREDICTED: delta-like protein 4 [Anolis carolinensis] | 7.0e-10 |
| pfu_aug2.0_2905.1_18964.t1 | gi|704280072|ref|XP_010163816.1| | PREDICTED: delta-like protein 1, partial [Caprimulgus carolinensis] | 7.0e-10 |
| pfu_aug2.0_2905.1_18964.t1 | gi|699586638|ref|XP_009864855.1| | PREDICTED: delta-like protein 1, partial [Apaloderma vittatum] | 1.0e-09 |
Transcript
| Transcript ID | pfu_aug2.0_2905.1_18964.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2905.1_18964.t1 atgcagatacaattcgctgtcgtctggcaactgatccagaatgtggggattcttgtacaaacctcccaaatttccatctt gataagtcgaatctttaaaatgcaggaaaaatgttcactgacaataacagcaacggcttctaatggtttcgtcccagaac atgactacagacttacagtaatgctagaggattaccctgactatactatatctatggggaaagagatcaggtctatacga agacccatgagtaaaattcctttacagttgacaataaggactatcacagatatgaaaccatgtaactctaaaagaggaca ttttgaaaatgtttatcccaactttaatgattatcaccgcgtcccttacccaggaccactcgtcggggttttcaaatcta gaatatttatgcaagctcaagatatcaataacacagaaattatgcttagtattccggcaaatatgcgttctgatcttctg cctgatgatcgcaatcatacgggaataccagtaaggagtgatgtggtacaggagtatttcagaatgatccccaatcgacg acaaatcgcagatactattttgtgttcttggggcaggtctccgaatggacgttacacatgtaaatgcccacacggataca aaccactggattgttcacacaaggtaacttgtgctgattttccatgtaaaaacaatggaacatgtgtggacactggtact atgtacatatgtgtttgtccaaaaggattcactggcttagactgcgaaacgaaactccatataaatgtcgataattcgaa ttccaacgtacttcctatagttttgggtgttataactggtgctggaatagttgccatgacgactgcatgctgctgttggt ggtttttactcgctggaaaaagaccgaggtcaagggaacgaaaggtcaaaccaaaggaactacccgaaaatggactcgat actctataa |
|
Protein
| Protein ID | pfu_aug2.0_2905.1_18964.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2905.1_18964.t1 MQIQFAVVWQLIQNVGILVQTSQISILISRIFKMQEKCSLTITATASNGFVPEHDYRLTVMLEDYPDYTISMGKEIRSIR RPMSKIPLQLTIRTITDMKPCNSKRGHFENVYPNFNDYHRVPYPGPLVGVFKSRIFMQAQDINNTEIMLSIPANMRSDLL PDDRNHTGIPVRSDVVQEYFRMIPNRRQIADTILCSWGRSPNGRYTCKCPHGYKPLDCSHKVTCADFPCKNNGTCVDTGT MYICVCPKGFTGLDCETKLHINVDNSNSNVLPIVLGVITGAGIVAMTTACCCWWFLLAGKRPRSRERKVKPKELPENGLD TL |
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