Gene
| Gene Model ID | pfu_aug2.0_2908.1_28980 |
|---|---|
| Locus | scaffold2908.1 : 9390 ... 23398 : - |
| To GenomeBrowser | scaffold2908.1:9390..23398 |
| Genes list of scaffold | scaffold2908.1 |
| Synonym | pfu_aug1.0_56717.1_48860 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2908.1_28980.t2 | 1 | 1 | Oxidored_q6 | 122 | 272 | 1.1e-20 | 73.5 | 1.4e-24 | 2.1e-20 | 72.6 |
Transcript
| Transcript ID | pfu_aug2.0_2908.1_28980.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2908.1_28980.t1 atggagcgacacagaaattttttagtagtgttgcgattgccaaaagccttccatcagtgtgtgaaccaatccctactaaa gcaaggcagtatcatatcgtgtcaacatagatgtttagttactcagaaacagaaaaaagaggaaactaaactctgcacaa gtttggtgccgtacagagaacagagcaccgaggctgctgcaccggcccctcagggaggagtgaggagcagtgaagaatgg gcattaaaggaacgtataccttacacaccattcacaaagcctgtcagtgaatatgactttgccatggcacggctggatga cttactgaactggggaaggaggggctctctttggccgttgacgtttggattagcatgctgtgctgtagaaatgatgcatt ttgccgctcctcgttatgatatggatcgctttggtgtggtatttcgagctaccccacgtcatgctgatgttattattgta gcaggaactctcacaaataaaatggccccagctttacggaaggtatacgaccagatgccggagcctcgctgggttttgtc gatgggaagctgcgctaacggaggaggatattatcattactcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncgctaacggaggaggatattat cattactcatacgctgtggtgcgagggtgtgacagaatcatacctgtagatatatatgtaccaggttgccctcccacggc tgaagcattactttacggagtcttgcagctacaaaagaagatcaagaggatgaatgtcatgcagtcgttttaccgacgac gattcttcaatccctctaaacaaccgtccaccgaagaaaggaacactgtgggatggagactgctcagtagattcagaaac agacacaagaaaaacttgccaaccagtcagaaatga |
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| Transcript ID | pfu_aug2.0_2908.1_28980.t2 |
| Definition | - |
>pfu_aug2.0_2908.1_28980.t2 atggcttccaaaacattgttgcgattgccaaaagccttccatcagtgtgtgaaccaatccctactaaagcaaggcagtat catatcgtgtcaacatagatgtttagttactcagaaacagaaaaaagaggaaactaaactctgcacaagtttggtgccgt acagagaacagagcaccgaggctgctgcaccggcccctcagggaggagtgaggagcagtgaagaatgggcattaaaggaa cgtataccttacacaccattcacaaagcctgtcagtgaatatgactttgccatggcacggctggatgacttactgaactg gggaaggaggggctctctttggccgttgacgtttggattagcatgctgtgctgtagaaatgatgcattttgccgctcctc gttatgatatggatcgctttggtgtggtatttcgagctaccccacgtcatgctgatgttattattgtagcaggaactctc acaaataaaatggccccagctttacggaaggtatacgaccagatgccggagcctcgctgggttttgtcgatgggaagctg cgctaacggaggaggatattatcattactcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncgctaacggaggaggatattatcattactcatac gctgtggtgcgagggtgtgacagaatcatacctgtagatatatatgtaccaggttgccctcccacggctgaagcattact ttacggagtcttgcagctacaaaagaagatcaagaggatgaatgtcatgcagtcgttttaccgacgacgattcttcaatc cctctaaacaaccgtccaccgaagaaaggaacactgtgggatggagactgctcagtagattcagaaacagacacaagaaa aacttgccaaccagtcagaaatga |
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Protein
| Protein ID | pfu_aug2.0_2908.1_28980.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2908.1_28980.t1 MERHRNFLVVLRLPKAFHQCVNQSLLKQGSIISCQHRCLVTQKQKKEETKLCTSLVPYREQSTEAAAPAPQGGVRSSEEW ALKERIPYTPFTKPVSEYDFAMARLDDLLNWGRRGSLWPLTFGLACCAVEMMHFAAPRYDMDRFGVVFRATPRHADVIIV AGTLTNKMAPALRKVYDQMPEPRWVLSMGSCANGGGYYHYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANGGGYY HYSYAVVRGCDRIIPVDIYVPGCPPTAEALLYGVLQLQKKIKRMNVMQSFYRRRFFNPSKQPSTEERNTVGWRLLSRFRN RHKKNLPTSQK |
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| Protein ID | pfu_aug2.0_2908.1_28980.t2 |
| Definition | - |
>pfu_aug2.0_2908.1_28980.t2 MASKTLLRLPKAFHQCVNQSLLKQGSIISCQHRCLVTQKQKKEETKLCTSLVPYREQSTEAAAPAPQGGVRSSEEWALKE RIPYTPFTKPVSEYDFAMARLDDLLNWGRRGSLWPLTFGLACCAVEMMHFAAPRYDMDRFGVVFRATPRHADVIIVAGTL TNKMAPALRKVYDQMPEPRWVLSMGSCANGGGYYHYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANGGGYYHYSY AVVRGCDRIIPVDIYVPGCPPTAEALLYGVLQLQKKIKRMNVMQSFYRRRFFNPSKQPSTEERNTVGWRLLSRFRNRHKK NLPTSQK |
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