Gene
| Gene Model ID | pfu_aug2.0_2908.1_28981 |
|---|---|
| Locus | scaffold2908.1 : 19356 ... 37526 : + |
| To GenomeBrowser | scaffold2908.1:19356..37526 |
| Genes list of scaffold | scaffold2908.1 |
| Synonym | pfu_aug1.0_446.1_29257 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2908.1_28981.t2 | 1 | 1 | PINIT | 76 | 232 | 3.30006e-42 | 143.9 | 2.8026e-45 | 6.00036e-42 | 143.1 |
| pfu_aug2.0_2908.1_28981.t2 | 1 | 1 | zf-MIZ | 277 | 325 | 2.0e-21 | 75.2 | 1.9e-24 | 4.0e-21 | 74.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2908.1_28981.t2 | gi|269784957|ref|NP_001161630.1| | PIAS-like protein [Saccoglossus kowalevskii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_2908.1_28981.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2908.1_28981.t1 atgtcatccgatggtgcattggattactccaatccaatgggtgcggactcgctgagccatgtgggagctatgggtttacc tgtacaccctgatgtcaagatgaagctcctaccgttctatgattgtctctcagaactcatgaaaatcacaagtttagctc caagaggatcaaataagttccaggagaatagtttcagctttcatctcacaccacaacaagctcaggacatagctatgtca agagatttcagaccaggttcaaagtttgattacaatacgcaaatccagctcagattttgcctgttagaaacgagttgtga acaagatgaccacttccctcctggcatctgtgtacgggtaaatggcaaaatggctccacttcctaatcctatcccaacga acaagcctaatgtagagcctaagcgacctggtagacctgtagatatcactcccctgtgtcgtctttcacctacgatgccc aatcaaattgaggtctcgtgggctacagaatttggaaggggttattgtctggcaatatttctggtaaagaaactctcctc cagtattttattatcacgactgaagcagtttggtaacagacatgctgatcatacacgggcgctgataaaggagaagttgt cacatgatgcagacagtgagatagctactaccagtttgagggtctccttaatatgtcctcttggtaagatgcgaatctca attccgtcaaggtctagtacatgtacacatctacagtgcttcgatgcctctacgttcctaatgatgaacgagaagaagtc cacttggatatgtcctgtctgcgataaacaagctccatttcataaactatttatagatggcttatttgtggagattttac gacaatcaccagacacaaacgacatcaaattccatgaagacggaagttggagtccacttaagtcagcaaaggagacacac gtcatatcctgtagtcccatggcaagcactagtaagactcggcctgagacctctacatcatcaggagcttcacctgcaaa gaagccgaagatggaagtgatagatttgacattaagttctgacgaggaggattcagacagtgacactgagtgtgatagtc cgctgcctgcatctacagcattagataacagtcctgccatcattaatctggactcacctaatcctgcaccctcatcgcct cacatgtttatgcctagtgcatttacacgttttcctcacactatagctgggcctccaatcaccataccacacccctttaa aggacctccccaacgtctctga |
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| Transcript ID | pfu_aug2.0_2908.1_28981.t2 |
| Definition | - |
>pfu_aug2.0_2908.1_28981.t2 atgagctttcgtgtgtctgagctacaagtattactgggatatgtgggatgtaacaaaacaggcagaaaaacagaactttt acaaagagcgctcaaactagtcgcaagaggctgctctgtacctgtacagataaaaatcagagaactttacaatgcatact gtgcattggattactccaatccaatgggtgcggactcgctgagccatgtgggagctatgggtttacctgtacaccctgat gtcaagatgaagctcctaccgttctatgattgtctctcagaactcatgaaaatcacaagtttagctccaagaggatcaaa taagttccaggagaatagtttcagctttcatctcacaccacaacaagctcaggacatagctatgtcaagagatttcagac caggttcaaagtttgattacaatacgcaaatccagctcagattttgcctgttagaaacgagttgtgaacaagatgaccac ttccctcctggcatctgtgtacgggtaaatggcaaaatggctccacttcctaatcctatcccaacgaacaagcctaatgt agagcctaagcgacctggtagacctgtagatatcactcccctgtgtcgtctttcacctacgatgcccaatcaaattgagg tctcgtgggctacagaatttggaaggggttattgtctggcaatatttctggtaaagaaactctcctccagtattttatta tcacgactgaagcagtttggtaacagacatgctgatcatacacgggcgctgataaaggagaagttgtcacatgatgcaga cagtgagatagctactaccagtttgagggtctccttaatatgtcctcttggtaagatgcgaatctcaattccgtcaaggt ctagtacatgtacacatctacagtgcttcgatgcctctacgttcctaatgatgaacgagaagaagtccacttggatatgt cctgtctgcgataaacaagctccatttcataaactatttatagatggcttatttgtggagattttacgacaatcaccaga cacaaacgacatcaaattccatgaagacggaagttggagtccacttaagtcagcaaaggagacacacgtcatatcctgta gtcccatggcaagcactagtaagactcggcctgagacctctacatcatcaggagcttcacctgcaaagaagccgaagatg gaagtgatagatttgacattaagttctgacgaggaggattcagacagtgacactgagtgtgatagtccgctgcctgcatc tacagcattagataacagtcctgccatcattaatctggactcacctaatcctgcaccctcatcgcctcacatgtttatgc ctagtgcatttacacgttttcctcacactatagctgggcctccaatcaccataccacacccctttaaaggacctccccaa cgtctctga |
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Protein
| Protein ID | pfu_aug2.0_2908.1_28981.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2908.1_28981.t1 MSSDGALDYSNPMGADSLSHVGAMGLPVHPDVKMKLLPFYDCLSELMKITSLAPRGSNKFQENSFSFHLTPQQAQDIAMS RDFRPGSKFDYNTQIQLRFCLLETSCEQDDHFPPGICVRVNGKMAPLPNPIPTNKPNVEPKRPGRPVDITPLCRLSPTMP NQIEVSWATEFGRGYCLAIFLVKKLSSSILLSRLKQFGNRHADHTRALIKEKLSHDADSEIATTSLRVSLICPLGKMRIS IPSRSSTCTHLQCFDASTFLMMNEKKSTWICPVCDKQAPFHKLFIDGLFVEILRQSPDTNDIKFHEDGSWSPLKSAKETH VISCSPMASTSKTRPETSTSSGASPAKKPKMEVIDLTLSSDEEDSDSDTECDSPLPASTALDNSPAIINLDSPNPAPSSP HMFMPSAFTRFPHTIAGPPITIPHPFKGPPQRL |
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| Protein ID | pfu_aug2.0_2908.1_28981.t2 |
| Definition | - |
>pfu_aug2.0_2908.1_28981.t2 MSFRVSELQVLLGYVGCNKTGRKTELLQRALKLVARGCSVPVQIKIRELYNAYCALDYSNPMGADSLSHVGAMGLPVHPD VKMKLLPFYDCLSELMKITSLAPRGSNKFQENSFSFHLTPQQAQDIAMSRDFRPGSKFDYNTQIQLRFCLLETSCEQDDH FPPGICVRVNGKMAPLPNPIPTNKPNVEPKRPGRPVDITPLCRLSPTMPNQIEVSWATEFGRGYCLAIFLVKKLSSSILL SRLKQFGNRHADHTRALIKEKLSHDADSEIATTSLRVSLICPLGKMRISIPSRSSTCTHLQCFDASTFLMMNEKKSTWIC PVCDKQAPFHKLFIDGLFVEILRQSPDTNDIKFHEDGSWSPLKSAKETHVISCSPMASTSKTRPETSTSSGASPAKKPKM EVIDLTLSSDEEDSDSDTECDSPLPASTALDNSPAIINLDSPNPAPSSPHMFMPSAFTRFPHTIAGPPITIPHPFKGPPQ RL |
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