Gene
| Gene Model ID | pfu_aug2.0_291.1_03959 |
|---|---|
| Locus | scaffold291.1 : 340459 ... 351400 : + |
| To GenomeBrowser | scaffold291.1:340459..351400 |
| Genes list of scaffold | scaffold291.1 |
| Synonym | pfu_aug1.0_9882.1_10021 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| dynein heavy chain axonemal-like | GO:0001539 GO:0003777 GO:0005524 GO:0005858 GO:0005874 GO:0007018 GO:0008152 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_291.1_03959.t1 | 2 | 1 | Dynein_heavy | 2 | 235 | 0.0 | 609.8 | 0.0 | 0.0 | 294.4 |
| pfu_aug2.0_291.1_03959.t1 | 2 | 2 | Dynein_heavy | 325 | 643 | 0.0 | 609.8 | 0.0 | 0.0 | 313.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_291.1_03959.t1 | gi|260804803|ref|XP_002597277.1| | hypothetical protein BRAFLDRAFT_118158 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_291.1_03959.t1 | gi|2905832|gb|AAC05809.1| | Gene product with similarity to dynein beta subunit [Homo sapiens] | 0.0 |
| pfu_aug2.0_291.1_03959.t1 | gi|340385138|ref|XP_003391067.1| | PREDICTED: dynein heavy chain 3, axonemal-like, partial [Amphimedon queenslandica] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_291.1_03959.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_291.1_03959.t1 atgatagcagatgctgttgagggaggaacatgggtggtgttacagaactgtcacttagcagcctcctggcttggtgaact ggagagaatctgtgaaactgtaataacagatgccacaaagactaagcccaccttcagattgtggttgaccagctacccat ctcctgtattcccagtatctgtactacagaacggtgtcaaaatgaccaatgaacctcccaaaggactgagggcaaactta ctacgctcatacctcaacgatccaatatcagacccagctttcttcaactcctgcaataaacctgctacttttgagaagct gttgtttgggttatgtttcttccatgccctcgtacaagaaaggaggaagtttggacctctaggatggaacataccgtatg aattcaacgagtcagatctcaggatttctgtgcggcagcttgagatgtttatcaatgattatgatgaccctccattagaa gctctatcctacctgaccggtcagtgtaactatggtggccgtgtcacagatgacctggatagacgactgatatcaagtct actggacatattctactgtgagcctactatatacgacaacaactacaagttctcgtccagcggcacatattacgctccta agaaaggcacgtacgaggattatgtggagtacatcaggagtttaccacttataccacatccggaggacaatgctcttgtt cacaagtctctcactgccatggcagcagttcatgattgtggctctaatttgattgagtatccgccttattcacctgatct tgctccatcagactttcatctgttcccaaaactgaaagcagctatttctggcacccacgttccgttcgatgatgacgtca tacttgcagtggatggctttctgaacagtcaagataagaagttctttaaaagttgtattgagacccttaaacaccggtgg caaaaatactatactgtacaggtgtttggtctacatgagaatgctgatatttccaaggaccagcaggagacccagcagct gtttgatggtatcttactcacccttccccgacagacttcagggggaggtaaatcttctcaggatatcatacaggagctgg cttctgatatattaacaaagattccaccagacttcaacctggaagaagctcagaccaagtatcctgtaaggtatgaggag tctatgaatacggtccttgtccaggagctgatccggtttaaccgactaacacaggtggtgaggaccagcttacaggacat aaagaaagccatcaaaggactggttgtcatgtctacagaactagaggatgtgtttgacagtatgatggtgggaaaggtac cagctatgtgggcagcaaagtcttacccttccctcaaaccacttggcagctatataactgatctgttagctagactgcaa ttctttaaggactggctttttggaggagcccctacagtgttttggatatcaggattttacttcacccagtcgtttctgac tggagtgttacagaattatgctaggaagtacaagattccaatagactatctgggatttgagtttgaggtcacaggccatg aacagaacatgagtagtagaccgagtaacggtgcatatgtgaagggattattcatggagggagctcgttggtgtcgcaga gagaaaaagatggcggagtcacatcccaaacagctgtacgacctcctgcctatcatcttacttaaacctggagagaagtc aaaattccaggaatctaaaacatacagctgtccagtgtacaagacaagtgcacggagaggtaccctgtccactaccggtc attctacaaactatgtactgagtattttgttacctacggacaaaccagaaaaccactggatcaacaggggcgtggcctta ctgtgtcagctagataactaa |
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Protein
| Protein ID | pfu_aug2.0_291.1_03959.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_291.1_03959.t1 MIADAVEGGTWVVLQNCHLAASWLGELERICETVITDATKTKPTFRLWLTSYPSPVFPVSVLQNGVKMTNEPPKGLRANL LRSYLNDPISDPAFFNSCNKPATFEKLLFGLCFFHALVQERRKFGPLGWNIPYEFNESDLRISVRQLEMFINDYDDPPLE ALSYLTGQCNYGGRVTDDLDRRLISSLLDIFYCEPTIYDNNYKFSSSGTYYAPKKGTYEDYVEYIRSLPLIPHPEDNALV HKSLTAMAAVHDCGSNLIEYPPYSPDLAPSDFHLFPKLKAAISGTHVPFDDDVILAVDGFLNSQDKKFFKSCIETLKHRW QKYYTVQVFGLHENADISKDQQETQQLFDGILLTLPRQTSGGGKSSQDIIQELASDILTKIPPDFNLEEAQTKYPVRYEE SMNTVLVQELIRFNRLTQVVRTSLQDIKKAIKGLVVMSTELEDVFDSMMVGKVPAMWAAKSYPSLKPLGSYITDLLARLQ FFKDWLFGGAPTVFWISGFYFTQSFLTGVLQNYARKYKIPIDYLGFEFEVTGHEQNMSSRPSNGAYVKGLFMEGARWCRR EKKMAESHPKQLYDLLPIILLKPGEKSKFQESKTYSCPVYKTSARRGTLSTTGHSTNYVLSILLPTDKPENHWINRGVAL LCQLDN |
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