Gene
| Gene Model ID | pfu_aug2.0_2910.1_02287 |
|---|---|
| Locus | scaffold2910.1 : 9356 ... 34015 : - |
| To GenomeBrowser | scaffold2910.1:9356..34015 |
| Genes list of scaffold | scaffold2910.1 |
| Synonym | pfu_aug1.0_4198.1_37826 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| fatty acid 2-hydroxylase | GO:0043227 GO:0044255 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2910.1_02287.t1 | 1 | 1 | Cyt-b5 | 7 | 78 | 5.5e-15 | 54.9 | 2.3e-18 | 1.1e-14 | 53.9 |
| pfu_aug2.0_2910.1_02287.t1 | 2 | 1 | FA_hydroxylase | 221 | 221 | 9.8e-06 | 25.9 | 1.2 | 6100.0 | -2.4 |
| pfu_aug2.0_2910.1_02287.t1 | 2 | 2 | FA_hydroxylase | 286 | 353 | 9.8e-06 | 25.9 | 2.0e-09 | 9.8e-06 | 25.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2910.1_02287.t1 | gi|198438164|ref|XP_002126665.1| | PREDICTED: fatty acid 2-hydroxylase [Ciona intestinalis] | 0.0 |
| pfu_aug2.0_2910.1_02287.t1 | gi|586547582|ref|XP_006908884.1| | PREDICTED: fatty acid 2-hydroxylase [Pteropus alecto] | 0.0 |
| pfu_aug2.0_2910.1_02287.t1 | gi|512852070|ref|XP_004887462.1| | 0.0 | |
| pfu_aug2.0_2910.1_02287.t1 | gi|335289141|ref|XP_003126916.2| | PREDICTED: fatty acid 2-hydroxylase [Sus scrofa] | 0.0 |
| pfu_aug2.0_2910.1_02287.t1 | gi|635033017|ref|XP_007991822.1| | PREDICTED: fatty acid 2-hydroxylase isoform X1 [Chlorocebus sabaeus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_2910.1_02287.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2910.1_02287.t1 atggaattatgcgaggatcaaattgataacttgcggaagagtggaagaattattgtgtttcataacaacaaagtgtacga tgtgacagaattcgttgatcgtcacccggggggtcgggaatacatggaggaacacgccgggagggatgttacacaagtga tgaagacagagaaacctcacagtcacagcttagcggcatactcaatactcaaaacttatcatataggacatcttactcag aaaaatggaaaattaaaacacagagataagaacggtgaaattcactcctatacgaatggttctataaatggtaaaattga aaatggtatcactcatagaatgacaaacggcaagtcggagagcaacgggacagtgcatacaaaacaaaacggggaagtca ggaagaaaccaagatggggcccatccaacggaaaggatgatctgatagactggagtaaacccattttattccaagtgccg tacctcggagacaaatactgggaatgggtacatactcctatagacggtcgcttccgcttgttttactcggacatctgtga gttttgttcagtgtgtccttggtggttagtgcccctgatctgggttcccttcatctttacactgctgtatctctcatatc aaggtttccaagatggaccggtgttatggtgggccactatcactaaagatattaccatcagtctccctatgtctatgtac catatgcctgtgttatttctgttggggcttctaatgtggactctggtagagaattttcccatttctgatttgctaaaaca gccgctctgtgaaatactcaaataggcacctatggacaagaagcgattggtattccctcctgtaccatgtgcgtgtttgg cctttgttgtttatagcgtctatgcaatgtttgctccagctaccattgccatgtgtttgtttgcagggacagttacaggt tatgtagcttatgatatggtgcattattacatacatcacgggacgccatacggatcttacttcaaatctctgaagagtta tcatgtaaaacatcattataaagatcaaacacgaggatttggaatttcatcgaagatgtgggattatccattcggaactc tgataaaggaatag |
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Protein
| Protein ID | pfu_aug2.0_2910.1_02287.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2910.1_02287.t1 MELCEDQIDNLRKSGRIIVFHNNKVYDVTEFVDRHPGGREYMEEHAGRDVTQVMKTEKPHSHSLAAYSILKTYHIGHLTQ KNGKLKHRDKNGEIHSYTNGSINGKIENGITHRMTNGKSESNGTVHTKQNGEVRKKPRWGPSNGKDDLIDWSKPILFQVP YLGDKYWEWVHTPIDGRFRLFYSDICEFCSVCPWWLVPLIWVPFIFTLLYLSYQGFQDGPVLWWATITKDITISLPMSMY HMPVLFLLGLLMWTLVENFPISDLLKQPLCEILKXAPMDKKRLVFPPVPCACLAFVVYSVYAMFAPATIAMCLFAGTVTG YVAYDMVHYYIHHGTPYGSYFKSLKSYHVKHHYKDQTRGFGISSKMWDYPFGTLIKE |
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