Gene
| Gene Model ID | pfu_aug2.0_2926.1_22237 |
|---|---|
| Locus | scaffold2926.1 : 70836 ... 78185 : + |
| To GenomeBrowser | scaffold2926.1:70836..78185 |
| Genes list of scaffold | scaffold2926.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| trmt1-like protein | GO:0005488 GO:0008152 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2926.1_22237.t1 | 1 | 1 | TRM | 20 | 139 | 3.0e-18 | 65.8 | 5.1e-22 | 3.8e-18 | 65.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2926.1_22237.t1 | gi|676425400|ref|XP_009044332.1| | hypothetical protein LOTGIDRAFT_184794 [Lottia gigantea] | 2.0e-34 |
| pfu_aug2.0_2926.1_22237.t1 | gi|701388794|ref|XP_009966076.1| | PREDICTED: LOW QUALITY PROTEIN: TRMT1-like protein, partial [Tyto alba] | 2.0e-29 |
| pfu_aug2.0_2926.1_22237.t1 | gi|696968233|ref|XP_009554667.1| | PREDICTED: TRMT1-like protein [Cuculus canorus] | 4.0e-28 |
| pfu_aug2.0_2926.1_22237.t1 | gi|698393217|ref|XP_009806628.1| | PREDICTED: TRMT1-like protein [Gavia stellata] | 4.0e-28 |
| pfu_aug2.0_2926.1_22237.t1 | gi|620963827|ref|XP_007667172.1| | PREDICTED: TRMT1-like protein isoform X2 [Ornithorhynchus anatinus] | 4.0e-27 |
Transcript
| Transcript ID | pfu_aug2.0_2926.1_22237.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2926.1_22237.t1 atgctcccagaatcaaagatgaaggaagtggccttaaagggggcataatatctaattccccatggtagtatgaccagtta ctttgatgccgtcttcaccaacatatgtaataagggaattctgtgtgtctcctcctccgacatctcacctcagtttataa ggacgtcacacgtcgttaggcgacacttccaggccaatgtgatcaagacggactacatgagagagatggctgttagagtc gtgttggcagctatggtaaggtcagcagccaactgcaacaaaggcctggacgttctatgcagcatgtgtattgatgattt ctttctgatcgttgtacgagtgttaaggggacctaaacatgcagacaaagctgtggaggggttacgtcccttacttcact gtctgatttgtgaagatcacatgttccttccgcactgtaatacacctattg |
|
Protein
| Protein ID | pfu_aug2.0_2926.1_22237.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2926.1_22237.t1 MLPESKMKEVALKGAXYLIPHGSMTSYFDAVFTNICNKGILCVSSSDISPQFIRTSHVVRRHFQANVIKTDYMREMAVRV VLAAMVRSAANCNKGLDVLCSMCIDDFFLIVVRVLRGPKHADKAVEGLRPLLHCLICEDHMFLPHCNTPI |
|