Gene
| Gene Model ID | pfu_aug2.0_2948.1_28991 |
|---|---|
| Locus | scaffold2948.1 : 27621 ... 34715 : - |
| To GenomeBrowser | scaffold2948.1:27621..34715 |
| Genes list of scaffold | scaffold2948.1 |
| Synonym | pfu_aug1.0_1628.1_15561 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2948.1_28991.t1 | 7 | 1 | Ank_3 | 339 | 365 | 5.0e-20 | 69.5 | 0.2 | 600.0 | 1.2 |
| pfu_aug2.0_2948.1_28991.t1 | 4 | 1 | Ank_2 | 343 | 443 | 1.7e-31 | 108.3 | 2.3e-17 | 7.0e-14 | 51.9 |
| pfu_aug2.0_2948.1_28991.t1 | 6 | 1 | Ank | 343 | 365 | 1.3e-24 | 84.7 | 0.028 | 82.0 | 3.2 |
| pfu_aug2.0_2948.1_28991.t1 | 7 | 2 | Ank_3 | 385 | 410 | 5.0e-20 | 69.5 | 1.3e-07 | 0.00038 | 20.4 |
| pfu_aug2.0_2948.1_28991.t1 | 8 | 1 | Ank_4 | 385 | 436 | 3.7e-18 | 65.5 | 1.1e-09 | 3.4e-06 | 27.4 |
| pfu_aug2.0_2948.1_28991.t1 | 6 | 2 | Ank | 386 | 411 | 1.3e-24 | 84.7 | 6.7e-08 | 0.0002 | 21.0 |
| pfu_aug2.0_2948.1_28991.t1 | 7 | 1 | Ank_5 | 389 | 413 | 1.7e-12 | 47.1 | 0.00081 | 2.4 | 8.5 |
| pfu_aug2.0_2948.1_28991.t1 | 7 | 2 | Ank_5 | 411 | 438 | 1.7e-12 | 47.1 | 0.012 | 35.0 | 4.8 |
| pfu_aug2.0_2948.1_28991.t1 | 6 | 3 | Ank | 414 | 442 | 1.3e-24 | 84.7 | 7.4e-06 | 0.022 | 14.5 |
| pfu_aug2.0_2948.1_28991.t1 | 7 | 3 | Ank_3 | 414 | 441 | 5.0e-20 | 69.5 | 1.6e-05 | 0.048 | 13.9 |
| pfu_aug2.0_2948.1_28991.t1 | 8 | 2 | Ank_4 | 422 | 453 | 3.7e-18 | 65.5 | 0.0012 | 3.5 | 8.2 |
| pfu_aug2.0_2948.1_28991.t1 | 4 | 2 | Ank_2 | 467 | 517 | 1.7e-31 | 108.3 | 5.3e-10 | 1.6e-06 | 28.3 |
| pfu_aug2.0_2948.1_28991.t1 | 8 | 3 | Ank_4 | 480 | 508 | 3.7e-18 | 65.5 | 0.00015 | 0.44 | 11.1 |
| pfu_aug2.0_2948.1_28991.t1 | 6 | 4 | Ank | 488 | 515 | 1.3e-24 | 84.7 | 2.5e-07 | 0.00074 | 19.2 |
| pfu_aug2.0_2948.1_28991.t1 | 7 | 4 | Ank_3 | 488 | 516 | 5.0e-20 | 69.5 | 1.8e-06 | 0.0052 | 16.8 |
| pfu_aug2.0_2948.1_28991.t1 | 7 | 3 | Ank_5 | 488 | 515 | 1.7e-12 | 47.1 | 2.8e-06 | 0.0083 | 16.3 |
| pfu_aug2.0_2948.1_28991.t1 | 8 | 4 | Ank_4 | 492 | 517 | 3.7e-18 | 65.5 | 8.0e-05 | 0.24 | 11.9 |
| pfu_aug2.0_2948.1_28991.t1 | 4 | 3 | Ank_2 | 642 | 668 | 1.7e-31 | 108.3 | 0.18 | 530.0 | 1.0 |
| pfu_aug2.0_2948.1_28991.t1 | 7 | 4 | Ank_5 | 647 | 665 | 1.7e-12 | 47.1 | 1.0 | 3000.0 | -1.4 |
| pfu_aug2.0_2948.1_28991.t1 | 7 | 5 | Ank_3 | 648 | 665 | 5.0e-20 | 69.5 | 0.91 | 2700.0 | -0.8 |
| pfu_aug2.0_2948.1_28991.t1 | 8 | 5 | Ank_4 | 649 | 665 | 3.7e-18 | 65.5 | 0.79 | 2300.0 | -0.8 |
| pfu_aug2.0_2948.1_28991.t1 | 4 | 4 | Ank_2 | 902 | 999 | 1.7e-31 | 108.3 | 1.4e-07 | 0.0004 | 20.6 |
| pfu_aug2.0_2948.1_28991.t1 | 8 | 6 | Ank_4 | 909 | 927 | 3.7e-18 | 65.5 | 0.08 | 240.0 | 2.4 |
| pfu_aug2.0_2948.1_28991.t1 | 7 | 5 | Ank_5 | 909 | 929 | 1.7e-12 | 47.1 | 0.17 | 500.0 | 1.1 |
| pfu_aug2.0_2948.1_28991.t1 | 6 | 5 | Ank | 918 | 960 | 1.3e-24 | 84.7 | 4.8e-06 | 0.014 | 15.1 |
| pfu_aug2.0_2948.1_28991.t1 | 7 | 6 | Ank_3 | 918 | 956 | 5.0e-20 | 69.5 | 0.00093 | 2.7 | 8.4 |
| pfu_aug2.0_2948.1_28991.t1 | 8 | 7 | Ank_4 | 944 | 968 | 3.7e-18 | 65.5 | 1.7e-05 | 0.05 | 14.1 |
| pfu_aug2.0_2948.1_28991.t1 | 7 | 6 | Ank_5 | 946 | 968 | 1.7e-12 | 47.1 | 0.002 | 6.1 | 7.2 |
| pfu_aug2.0_2948.1_28991.t1 | 6 | 6 | Ank | 961 | 1004 | 1.3e-24 | 84.7 | 0.048 | 140.0 | 2.5 |
| pfu_aug2.0_2948.1_28991.t1 | 7 | 7 | Ank_3 | 961 | 969 | 5.0e-20 | 69.5 | 3.3 | 9900.0 | -2.6 |
| pfu_aug2.0_2948.1_28991.t1 | 7 | 7 | Ank_5 | 988 | 1012 | 1.7e-12 | 47.1 | 0.43 | 1300.0 | -0.2 |
| pfu_aug2.0_2948.1_28991.t1 | 8 | 8 | Ank_4 | 991 | 1010 | 3.7e-18 | 65.5 | 0.85 | 2500.0 | -0.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2948.1_28991.t1 | gi|514727531|ref|XP_005015423.1| | PREDICTED: protein fem-1 homolog C, partial [Anas platyrhynchos] | 6.0e-28 |
| pfu_aug2.0_2948.1_28991.t1 | gi|564242816|ref|XP_006278198.1| | PREDICTED: protein fem-1 homolog C [Alligator mississippiensis] | 2.0e-27 |
| pfu_aug2.0_2948.1_28991.t1 | gi|683929612|ref|XP_009094589.1| | PREDICTED: protein fem-1 homolog C [Serinus canaria] | 4.0e-27 |
| pfu_aug2.0_2948.1_28991.t1 | gi|701382935|ref|XP_009993563.1| | PREDICTED: protein fem-1 homolog C [Chaetura pelagica] | 4.0e-27 |
| pfu_aug2.0_2948.1_28991.t1 | gi|410947967|ref|XP_003980713.1| | PREDICTED: protein fem-1 homolog C [Felis catus] | 8.0e-27 |
Transcript
| Transcript ID | pfu_aug2.0_2948.1_28991.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2948.1_28991.t1 atggaaaaggagcagaggcagaatgttgaagacagtaacgtcttgtcttccgacgtcagaatggaagtggaggaatcaat tatgaatgcagaacaggatttccaggatgaaaatgccgtattgattagaggagaatgtggtcaatatggtaatgtcagca gtcctaagccatctacgagtaggcagcaggaaattaaagataatggcttacacagaaatgaaggaatacttgaggacatt ggtcactcatcgggatgtgggacgttgaggaataatgaacaagacattcctccattagatggacgaaggaggatggagga ccaaggaggcagtgagcagaaaatggaaaatgaggatttcagtcctcaaccatccaccagtgggatacagaggattgaaa tggaggatgaggaagggggaaatgcctctagtcatgaggatgaggaagggggagatgcctctagtcatatggtgaatgtt gaggaacaaaatgaggacagcaatcaagaaatggaggaagcaaatggtgaaattaacgttgataatgatgaaaacgaggg tgagggagaggagcaaaatgatgatcaggataatagtgaaaacgaggacattattgatgaagattctaacactgaagaaa aatctgagcaaacatggagttatgagaatatagagtcgtgtcagtgtaagggaaagtgtcctgaatgccctatagtccct aaccacaataaaaaactgaaatcggaaaactcggaaaagaagcagtgtccatgcggcacaaaatgctgcaaagaagcgat acgcaaaatgtacgaagattctatcaaacgtttgatgaaatgcatccagcttcggagtctgttaggtgaggaatttcaga agttttacaagatttttgaaaacatgccgatgacagctagagaatttctgacgcaatatccggtagacaataaaaacgag atcttttctatccacctgcttacgcaacaaatagaaattcactttaggtctaaaactcttgtgtcgctagctgcctcttt aggtgttcaagatgccatagaattttttgtggagcagtgcaatgctgatgtgaatttcacgggaattttcagaaagggtg ctcttaccggaacaaacctcttgccaacggaaccacctcttttccacgcagttcatcaaggaaaactaaacgtagtaaaa tacttggtgcaatctggagctgacgtcaactattctagtcatgggcagtcgattctattcattgcttgttgcagaagcgt gaatttagacattgtcaaattcttgttagaaaacaaagctcgcatttgctgcattcctcaaggtggaataaaatgtctac aggaaattctaactaccattgtaatttcagaaccaaatggtccggaaatttttgaacttgtagtagacaacatggaaaat gttgacgaatgtgacgaaatggggaaaacctcgctgtacactgctgtaaaaactcagcacctagaggcaattagaatact gatagagaaaggagctgatattaatgaaactttcaaacggagcaactgcacagaaattgaggattgcggatgtgaaaaag caaccggaagaaagaggaagtactcaaacactagtgatttgagtgagactatggaggtacatgtagaagacagtaaagaa gttttgactgcttgtagttctgaattaaaagagagtgacagtgaaaaaagtgattcacctatgatggaacaaccatataa tggggaagaatcagcttgttcatcaactcatgataactcagtgaaggaggacattgtaggtaatgtgtcaactcaacatg ctcagaaagacatcaaggaaagcaaagtagaagagcctcatgaagaggagctcacaaagagttcaaggaaatataccggt gcttttgagccaaaagagcttcatcctattgtttactcggcctataaaggaaacaagtacatagtgaactatcttgcctc tctttcacagattccgctctgtgaggtcgccaatgcgtatgaggtattgggtgctgaaagggcactgagagaaagtgcta cctcaaattcaggcctcaaatactggctgaaagctgccaaaatacgaagatcctgtgaagatggacctattgtgaaaaga aatctctcagaaccttatgagacattgaacttttttgctgagaaaaatacagaagaggagatcgaaagcctgaggggaaa gcgtgaagaaacattagctcaggccatcatggttctagaaagagtaatagattacaaggatcaagaaacattgcgtgcat tggcaagtttagctgggggtcatttagaggctgggcgagttatggaattcatcaaaattacactggatattcacgaacgc tacatgctaaacagcatcgatataatgtcatggtcgtgcaaggaactcctcaatcattggatcatgctcttcaactgcca agaattggattccgttacttttgatgcaatgatgtctgtttgcaaatcggtagaaaaacatttgcgtctgtacctagagg accatgcatatcgtgatccaattctgtttgactacatcgactggggtgaaagcacagatctcatgctatacttacttatg ttcatggaatctatctgtatccaccctaatgtcagcagggaagattatgatgaactcatgacattcattgaaaacctttt gcgacaaaattatcgggacggacagagaaaaacctttctgcacgtcgctgtccttaacaaagcattcagtatcgagggtg aggattattatcttctgaataacgatcagatggcatggctattaatagatctcggagcagacgtcaactctattgacaaa gatggcaaccgcccattgcatcttgtttattcacaattagctacgatgacggacgagaaagagcttgaacattttggtca atttgcagacatgctagttcaatctggtgctcatgtggatgtgttgaacaacaaaggggagagctgtgtagaattgtcga aatcgacaaactttcctcttgacgtagttgcgcacacatctttgaaatgtttaactgcaaggacgattctggataacaat atttcctataaaggggaggtgcccacagatgtggaagattggatcaaattccacatgaagcctgtgacatga |
|
Protein
| Protein ID | pfu_aug2.0_2948.1_28991.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2948.1_28991.t1 MEKEQRQNVEDSNVLSSDVRMEVEESIMNAEQDFQDENAVLIRGECGQYGNVSSPKPSTSRQQEIKDNGLHRNEGILEDI GHSSGCGTLRNNEQDIPPLDGRRRMEDQGGSEQKMENEDFSPQPSTSGIQRIEMEDEEGGNASSHEDEEGGDASSHMVNV EEQNEDSNQEMEEANGEINVDNDENEGEGEEQNDDQDNSENEDIIDEDSNTEEKSEQTWSYENIESCQCKGKCPECPIVP NHNKKLKSENSEKKQCPCGTKCCKEAIRKMYEDSIKRLMKCIQLRSLLGEEFQKFYKIFENMPMTAREFLTQYPVDNKNE IFSIHLLTQQIEIHFRSKTLVSLAASLGVQDAIEFFVEQCNADVNFTGIFRKGALTGTNLLPTEPPLFHAVHQGKLNVVK YLVQSGADVNYSSHGQSILFIACCRSVNLDIVKFLLENKARICCIPQGGIKCLQEILTTIVISEPNGPEIFELVVDNMEN VDECDEMGKTSLYTAVKTQHLEAIRILIEKGADINETFKRSNCTEIEDCGCEKATGRKRKYSNTSDLSETMEVHVEDSKE VLTACSSELKESDSEKSDSPMMEQPYNGEESACSSTHDNSVKEDIVGNVSTQHAQKDIKESKVEEPHEEELTKSSRKYTG AFEPKELHPIVYSAYKGNKYIVNYLASLSQIPLCEVANAYEVLGAERALRESATSNSGLKYWLKAAKIRRSCEDGPIVKR NLSEPYETLNFFAEKNTEEEIESLRGKREETLAQAIMVLERVIDYKDQETLRALASLAGGHLEAGRVMEFIKITLDIHER YMLNSIDIMSWSCKELLNHWIMLFNCQELDSVTFDAMMSVCKSVEKHLRLYLEDHAYRDPILFDYIDWGESTDLMLYLLM FMESICIHPNVSREDYDELMTFIENLLRQNYRDGQRKTFLHVAVLNKAFSIEGEDYYLLNNDQMAWLLIDLGADVNSIDK DGNRPLHLVYSQLATMTDEKELEHFGQFADMLVQSGAHVDVLNNKGESCVELSKSTNFPLDVVAHTSLKCLTARTILDNN ISYKGEVPTDVEDWIKFHMKPVT |
|