Gene
| Gene Model ID | pfu_aug2.0_297.1_23820 |
|---|---|
| Locus | scaffold297.1 : 61356 ... 69314 : + |
| To GenomeBrowser | scaffold297.1:61356..69314 |
| Genes list of scaffold | scaffold297.1 |
| Synonym | pfu_aug1.0_18435.1_47213 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_297.1_23820.t2 | 1 | 1 | HNOB | 8 | 126 | 5.7e-24 | 84.5 | 2.3e-27 | 1.1e-23 | 83.6 |
| pfu_aug2.0_297.1_23820.t2 | 3 | 1 | HNOBA | 229 | 316 | 2.2e-19 | 69.5 | 5.4e-18 | 2.7e-14 | 52.9 |
| pfu_aug2.0_297.1_23820.t2 | 3 | 2 | HNOBA | 331 | 354 | 2.2e-19 | 69.5 | 0.00052 | 2.6 | 7.2 |
| pfu_aug2.0_297.1_23820.t2 | 3 | 3 | HNOBA | 415 | 439 | 2.2e-19 | 69.5 | 0.0018 | 9.0 | 5.4 |
| pfu_aug2.0_297.1_23820.t2 | 1 | 1 | Guanylate_cyc | 452 | 629 | 0.0 | 161.6 | 0.0 | 0.0 | 160.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_297.1_23820.t2 | gi|511911832|ref|XP_004775286.1| | PREDICTED: guanylate cyclase soluble subunit beta-2-like [Mustela putorius furo] | 0.0 |
| pfu_aug2.0_297.1_23820.t2 | gi|511911830|ref|XP_004775285.1| | 0.0 | |
| pfu_aug2.0_297.1_23820.t2 | gi|472359885|ref|XP_004399555.1| | 0.0 | |
| pfu_aug2.0_297.1_23820.t2 | gi|725566335|ref|XP_010336204.1| | PREDICTED: guanylate cyclase soluble subunit beta-2 [Saimiri boliviensis boliviensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_297.1_23820.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_297.1_23820.t1 atgtatgtccttaaactctccttaacaccatcagctgtagcacaaataggtttccaaaaggagacgctactgaagctaat cggggaatacttgtttgagttcatcaagaagttcggatacgatgagatcatcagaaaccttgcccataatatcctggagt ttatccagaatttggactttatccagtgttactttaaggaggagtaccaggacatcatcacaccctctttccactgtgac gaggactcagtctcagacaggatggtcctacattacttctcccacagaccaggctatcactctatggtggaaggctttgt gacaaatgctgctaaatgtctgtacaagatggacctgaacattgacgtcatttcgattacgtctgagtcagtatcatcag acaatggcttccgtgaacacgtggtcttcaacataatcgccaaaagaatactagagaccatggatgattcccctccaaca tttgtagcacagacgaaaaaacatggcgagcgccaaattctgaaagatgatgttgatgcagtgagaagaaaacttgaaca gatcaaaagagaacttggtgaagaagcacttccggtaaacaaattcagaagcgcacgcgcaaaatggaaggcaatagcaa agataagtcttctgagtcgagggtttgttccgaactaccccgacgccatttcaataaatccgcgaatgttcattgaagta ttcccataccatgtaatatttgacagcacaatgaatgtccatcagtccggcatcaagattcaacagctgatgccatcgat tcgaaatagatcggcagatttgaaagactttttcaaactgaagtttccgagatttacagatctttcctttgaaaacatga aaaagttcataatgacacccatcattctggagctcagaagagaacggatgtcaaaggaatggacaagaagaccacctctg atgatcaaaggcaagtaccgatgctgggctgatctggaagcgagaggaatgaaaatggcagaccttcctatgtgggatgc cacaagagacttccttctgacagatgttgcctacagagttgggacaggtaaatattacggccactttcttatggagagtg gtgttttggcacatgacgggcattacggtacatcagggacagtatcagatggcgatgaaaaggggatgctagaggcagaa ggaaaaggttcattccctgcaaggtccaggtggaatatgctacagagagaactggacaatgagagggtcaagaacgactg tttataccatgctttccttcccaggccagttgctcatatggtcagaagtggaattattccaccaggagagatgttcgccg atgtgtctgcacttttctgtgatattgtccacttcatccagcttgtggccaactgtcagcctagagacgtggtcggagta ttgaactctctgaccactcgctttgatagagtcaccaaagtacacgacacattcagggtcgagtccattggagatgcttg tgtcatcatctcgggagcgccggagaaagtacccaatcatgcggaacgaatagctaatacagcccttggaatgatgtgtc tctcgcaagaggtggcttctcctttgtacggagagaaaatacagtgttatgatgtcgtcgtttaa |
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| Transcript ID | pfu_aug2.0_297.1_23820.t2 |
| Definition | - |
>pfu_aug2.0_297.1_23820.t2 atgtatgtccttaaactctccttaacaccatcagctgtagcacaaataggtttccaaaaggagacgctactgaagctaat cggggaatacttgtttgagttcatcaagaagttcggatacgatgagatcatcagaaaccttgcccataatatcctggagt ttatccagaatttggactttatccagtgttactttaaggaggagtaccaggacatcatcacaccctctttccactgtgac gaggactcagtctcagacaggatggtcctacattacttctcccacagaccaggctatcactctatggtggaaggctttgt gacaaatgctgctaaatgtctgtacaagatggacctgaacattgacgtcatttcgattacgtctgagtcagtatcatcag acaatggcttccgtgaacacgtggtcttcaacataatcgccaaaagaatactagagaccatggatgattcccctccaaca tttgtagcacagacgaaaaaacatggcgagcgccaaattctgaaagatgatgttgatgcagtgagaagaaaacttgaaca gatcaaaagagaacttggtgaagaagcacttccggtaaacaaattcagaagcgcacgcgcaaaatggaaggcaatagcaa agataagtcttctgagtcgagggtttgttccgaactaccccgacgccatttcaataaatccgcgaatgttcattgaagta ttcccataccatgtaatatttgacagcacaatgaatgtccatcagtccggcatcaagattcaacagctgatgccatcgat tcgaaatagatcggcagatttgaaagactttttcaaactgaagtttccgagatttacagatctttcctttgaaaacatga aaaagttcataatgacacccatcattctggagctcagaagagaacggatgtcaaaggaatggacaagaagaccacctctg atgatcaaaggcaagtaccgatgctgggctgatctggaagcgagaggaatgaaaatggcagaccttcctatgtgggatgc cacaagagacttccttctgacagatgttgcctacagagttgggacaggtaaatattacggccactttcttatggagagtg gtgttttggcacatgacgggcattacggtacatcagggacagtatcagatggcgatgaaaaggggatgctagaggcagaa ggaaaaggttcattccctgcaaggtccaggtggaatatgctacagagagaactggacaatgagagggtcaagaacgactg tttataccatgctttccttcccaggccagttgctcatatggtcagaagtggaattattccaccaggagagatgttcgccg atgtgtctgcacttttctgtgatattgtccacttcatccagcttgtggccaactgtcagcctagagacgtggtcggagta ttgaactctctgaccactcgctttgatagagtcaccaaagtacacgacacattcagggtcgagtccattggagatgcttg tgtcatcatctcgggagcgccggagaaagtacccaatcatgcggaacgaatagctaatacagcccttggaatgatgtgtc tctcgcaagaggtggcttctcctttgtacggagagaaaatacagatccgtattggtgtccacactgggtccatgctctgt ggtgttgtgggaaccaaactgcctcggtttattgtgctcggagagactgctgtagtggcgtctaaaatggagagtcatgg tgtaccgggaaagatacacatcagtccctcaacatacagtgccattaaatcccgaggattcaccatagaagagagaggga agacagagcttcgtggatatggcgccctgaacacgtatttcttggtggccaatgaacatgcgacagacgatgacctgtgt ggccgacccagaataggtactcaggaaatatcatttatcaatgaggggaaagaagaaaaaccttcctttgacaagaaaaa caaaaaggccgttcagactccttcctccggaattggaagcagacctccaacaggtgacagtgagattgtgccttttgtgt actga |
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Protein
| Protein ID | pfu_aug2.0_297.1_23820.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_297.1_23820.t1 MYVLKLSLTPSAVAQIGFQKETLLKLIGEYLFEFIKKFGYDEIIRNLAHNILEFIQNLDFIQCYFKEEYQDIITPSFHCD EDSVSDRMVLHYFSHRPGYHSMVEGFVTNAAKCLYKMDLNIDVISITSESVSSDNGFREHVVFNIIAKRILETMDDSPPT FVAQTKKHGERQILKDDVDAVRRKLEQIKRELGEEALPVNKFRSARAKWKAIAKISLLSRGFVPNYPDAISINPRMFIEV FPYHVIFDSTMNVHQSGIKIQQLMPSIRNRSADLKDFFKLKFPRFTDLSFENMKKFIMTPIILELRRERMSKEWTRRPPL MIKGKYRCWADLEARGMKMADLPMWDATRDFLLTDVAYRVGTGKYYGHFLMESGVLAHDGHYGTSGTVSDGDEKGMLEAE GKGSFPARSRWNMLQRELDNERVKNDCLYHAFLPRPVAHMVRSGIIPPGEMFADVSALFCDIVHFIQLVANCQPRDVVGV LNSLTTRFDRVTKVHDTFRVESIGDACVIISGAPEKVPNHAERIANTALGMMCLSQEVASPLYGEKIQCYDVVV |
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| Protein ID | pfu_aug2.0_297.1_23820.t2 |
| Definition | - |
>pfu_aug2.0_297.1_23820.t2 MYVLKLSLTPSAVAQIGFQKETLLKLIGEYLFEFIKKFGYDEIIRNLAHNILEFIQNLDFIQCYFKEEYQDIITPSFHCD EDSVSDRMVLHYFSHRPGYHSMVEGFVTNAAKCLYKMDLNIDVISITSESVSSDNGFREHVVFNIIAKRILETMDDSPPT FVAQTKKHGERQILKDDVDAVRRKLEQIKRELGEEALPVNKFRSARAKWKAIAKISLLSRGFVPNYPDAISINPRMFIEV FPYHVIFDSTMNVHQSGIKIQQLMPSIRNRSADLKDFFKLKFPRFTDLSFENMKKFIMTPIILELRRERMSKEWTRRPPL MIKGKYRCWADLEARGMKMADLPMWDATRDFLLTDVAYRVGTGKYYGHFLMESGVLAHDGHYGTSGTVSDGDEKGMLEAE GKGSFPARSRWNMLQRELDNERVKNDCLYHAFLPRPVAHMVRSGIIPPGEMFADVSALFCDIVHFIQLVANCQPRDVVGV LNSLTTRFDRVTKVHDTFRVESIGDACVIISGAPEKVPNHAERIANTALGMMCLSQEVASPLYGEKIQIRIGVHTGSMLC GVVGTKLPRFIVLGETAVVASKMESHGVPGKIHISPSTYSAIKSRGFTIEERGKTELRGYGALNTYFLVANEHATDDDLC GRPRIGTQEISFINEGKEEKPSFDKKNKKAVQTPSSGIGSRPPTGDSEIVPFVY |
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