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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_297.1_23820
Locus scaffold297.1 : 61356 ... 69314 : +
To GenomeBrowser scaffold297.1:61356..69314
Genes list of scaffold scaffold297.1
Synonym pfu_aug1.0_18435.1_47213

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_297.1_23820.t2 1 1 HNOB 8 126 5.7e-24 84.5 2.3e-27 1.1e-23 83.6
pfu_aug2.0_297.1_23820.t2 3 1 HNOBA 229 316 2.2e-19 69.5 5.4e-18 2.7e-14 52.9
pfu_aug2.0_297.1_23820.t2 3 2 HNOBA 331 354 2.2e-19 69.5 0.00052 2.6 7.2
pfu_aug2.0_297.1_23820.t2 3 3 HNOBA 415 439 2.2e-19 69.5 0.0018 9.0 5.4
pfu_aug2.0_297.1_23820.t2 1 1 Guanylate_cyc 452 629 0.0 161.6 0.0 0.0 160.9

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_297.1_23820.t2 gi|511911832|ref|XP_004775286.1| PREDICTED: guanylate cyclase soluble subunit beta-2-like [Mustela putorius furo] 0.0
pfu_aug2.0_297.1_23820.t2 gi|511911830|ref|XP_004775285.1| 0.0
pfu_aug2.0_297.1_23820.t2 gi|472359885|ref|XP_004399555.1| 0.0
pfu_aug2.0_297.1_23820.t2 gi|725566335|ref|XP_010336204.1| PREDICTED: guanylate cyclase soluble subunit beta-2 [Saimiri boliviensis boliviensis] 0.0

Transcript
Transcript IDpfu_aug2.0_297.1_23820.t1
Definition-
>pfu_aug2.0_297.1_23820.t1
atgtatgtccttaaactctccttaacaccatcagctgtagcacaaataggtttccaaaaggagacgctactgaagctaat
cggggaatacttgtttgagttcatcaagaagttcggatacgatgagatcatcagaaaccttgcccataatatcctggagt
ttatccagaatttggactttatccagtgttactttaaggaggagtaccaggacatcatcacaccctctttccactgtgac
gaggactcagtctcagacaggatggtcctacattacttctcccacagaccaggctatcactctatggtggaaggctttgt
gacaaatgctgctaaatgtctgtacaagatggacctgaacattgacgtcatttcgattacgtctgagtcagtatcatcag
acaatggcttccgtgaacacgtggtcttcaacataatcgccaaaagaatactagagaccatggatgattcccctccaaca
tttgtagcacagacgaaaaaacatggcgagcgccaaattctgaaagatgatgttgatgcagtgagaagaaaacttgaaca
gatcaaaagagaacttggtgaagaagcacttccggtaaacaaattcagaagcgcacgcgcaaaatggaaggcaatagcaa
agataagtcttctgagtcgagggtttgttccgaactaccccgacgccatttcaataaatccgcgaatgttcattgaagta
ttcccataccatgtaatatttgacagcacaatgaatgtccatcagtccggcatcaagattcaacagctgatgccatcgat
tcgaaatagatcggcagatttgaaagactttttcaaactgaagtttccgagatttacagatctttcctttgaaaacatga
aaaagttcataatgacacccatcattctggagctcagaagagaacggatgtcaaaggaatggacaagaagaccacctctg
atgatcaaaggcaagtaccgatgctgggctgatctggaagcgagaggaatgaaaatggcagaccttcctatgtgggatgc
cacaagagacttccttctgacagatgttgcctacagagttgggacaggtaaatattacggccactttcttatggagagtg
gtgttttggcacatgacgggcattacggtacatcagggacagtatcagatggcgatgaaaaggggatgctagaggcagaa
ggaaaaggttcattccctgcaaggtccaggtggaatatgctacagagagaactggacaatgagagggtcaagaacgactg
tttataccatgctttccttcccaggccagttgctcatatggtcagaagtggaattattccaccaggagagatgttcgccg
atgtgtctgcacttttctgtgatattgtccacttcatccagcttgtggccaactgtcagcctagagacgtggtcggagta
ttgaactctctgaccactcgctttgatagagtcaccaaagtacacgacacattcagggtcgagtccattggagatgcttg
tgtcatcatctcgggagcgccggagaaagtacccaatcatgcggaacgaatagctaatacagcccttggaatgatgtgtc
tctcgcaagaggtggcttctcctttgtacggagagaaaatacagtgttatgatgtcgtcgtttaa
Transcript IDpfu_aug2.0_297.1_23820.t2
Definition-
>pfu_aug2.0_297.1_23820.t2
atgtatgtccttaaactctccttaacaccatcagctgtagcacaaataggtttccaaaaggagacgctactgaagctaat
cggggaatacttgtttgagttcatcaagaagttcggatacgatgagatcatcagaaaccttgcccataatatcctggagt
ttatccagaatttggactttatccagtgttactttaaggaggagtaccaggacatcatcacaccctctttccactgtgac
gaggactcagtctcagacaggatggtcctacattacttctcccacagaccaggctatcactctatggtggaaggctttgt
gacaaatgctgctaaatgtctgtacaagatggacctgaacattgacgtcatttcgattacgtctgagtcagtatcatcag
acaatggcttccgtgaacacgtggtcttcaacataatcgccaaaagaatactagagaccatggatgattcccctccaaca
tttgtagcacagacgaaaaaacatggcgagcgccaaattctgaaagatgatgttgatgcagtgagaagaaaacttgaaca
gatcaaaagagaacttggtgaagaagcacttccggtaaacaaattcagaagcgcacgcgcaaaatggaaggcaatagcaa
agataagtcttctgagtcgagggtttgttccgaactaccccgacgccatttcaataaatccgcgaatgttcattgaagta
ttcccataccatgtaatatttgacagcacaatgaatgtccatcagtccggcatcaagattcaacagctgatgccatcgat
tcgaaatagatcggcagatttgaaagactttttcaaactgaagtttccgagatttacagatctttcctttgaaaacatga
aaaagttcataatgacacccatcattctggagctcagaagagaacggatgtcaaaggaatggacaagaagaccacctctg
atgatcaaaggcaagtaccgatgctgggctgatctggaagcgagaggaatgaaaatggcagaccttcctatgtgggatgc
cacaagagacttccttctgacagatgttgcctacagagttgggacaggtaaatattacggccactttcttatggagagtg
gtgttttggcacatgacgggcattacggtacatcagggacagtatcagatggcgatgaaaaggggatgctagaggcagaa
ggaaaaggttcattccctgcaaggtccaggtggaatatgctacagagagaactggacaatgagagggtcaagaacgactg
tttataccatgctttccttcccaggccagttgctcatatggtcagaagtggaattattccaccaggagagatgttcgccg
atgtgtctgcacttttctgtgatattgtccacttcatccagcttgtggccaactgtcagcctagagacgtggtcggagta
ttgaactctctgaccactcgctttgatagagtcaccaaagtacacgacacattcagggtcgagtccattggagatgcttg
tgtcatcatctcgggagcgccggagaaagtacccaatcatgcggaacgaatagctaatacagcccttggaatgatgtgtc
tctcgcaagaggtggcttctcctttgtacggagagaaaatacagatccgtattggtgtccacactgggtccatgctctgt
ggtgttgtgggaaccaaactgcctcggtttattgtgctcggagagactgctgtagtggcgtctaaaatggagagtcatgg
tgtaccgggaaagatacacatcagtccctcaacatacagtgccattaaatcccgaggattcaccatagaagagagaggga
agacagagcttcgtggatatggcgccctgaacacgtatttcttggtggccaatgaacatgcgacagacgatgacctgtgt
ggccgacccagaataggtactcaggaaatatcatttatcaatgaggggaaagaagaaaaaccttcctttgacaagaaaaa
caaaaaggccgttcagactccttcctccggaattggaagcagacctccaacaggtgacagtgagattgtgccttttgtgt
actga

Protein
Protein IDpfu_aug2.0_297.1_23820.t1
Definition-
>pfu_aug2.0_297.1_23820.t1
MYVLKLSLTPSAVAQIGFQKETLLKLIGEYLFEFIKKFGYDEIIRNLAHNILEFIQNLDFIQCYFKEEYQDIITPSFHCD
EDSVSDRMVLHYFSHRPGYHSMVEGFVTNAAKCLYKMDLNIDVISITSESVSSDNGFREHVVFNIIAKRILETMDDSPPT
FVAQTKKHGERQILKDDVDAVRRKLEQIKRELGEEALPVNKFRSARAKWKAIAKISLLSRGFVPNYPDAISINPRMFIEV
FPYHVIFDSTMNVHQSGIKIQQLMPSIRNRSADLKDFFKLKFPRFTDLSFENMKKFIMTPIILELRRERMSKEWTRRPPL
MIKGKYRCWADLEARGMKMADLPMWDATRDFLLTDVAYRVGTGKYYGHFLMESGVLAHDGHYGTSGTVSDGDEKGMLEAE
GKGSFPARSRWNMLQRELDNERVKNDCLYHAFLPRPVAHMVRSGIIPPGEMFADVSALFCDIVHFIQLVANCQPRDVVGV
LNSLTTRFDRVTKVHDTFRVESIGDACVIISGAPEKVPNHAERIANTALGMMCLSQEVASPLYGEKIQCYDVVV
Protein IDpfu_aug2.0_297.1_23820.t2
Definition-
>pfu_aug2.0_297.1_23820.t2
MYVLKLSLTPSAVAQIGFQKETLLKLIGEYLFEFIKKFGYDEIIRNLAHNILEFIQNLDFIQCYFKEEYQDIITPSFHCD
EDSVSDRMVLHYFSHRPGYHSMVEGFVTNAAKCLYKMDLNIDVISITSESVSSDNGFREHVVFNIIAKRILETMDDSPPT
FVAQTKKHGERQILKDDVDAVRRKLEQIKRELGEEALPVNKFRSARAKWKAIAKISLLSRGFVPNYPDAISINPRMFIEV
FPYHVIFDSTMNVHQSGIKIQQLMPSIRNRSADLKDFFKLKFPRFTDLSFENMKKFIMTPIILELRRERMSKEWTRRPPL
MIKGKYRCWADLEARGMKMADLPMWDATRDFLLTDVAYRVGTGKYYGHFLMESGVLAHDGHYGTSGTVSDGDEKGMLEAE
GKGSFPARSRWNMLQRELDNERVKNDCLYHAFLPRPVAHMVRSGIIPPGEMFADVSALFCDIVHFIQLVANCQPRDVVGV
LNSLTTRFDRVTKVHDTFRVESIGDACVIISGAPEKVPNHAERIANTALGMMCLSQEVASPLYGEKIQIRIGVHTGSMLC
GVVGTKLPRFIVLGETAVVASKMESHGVPGKIHISPSTYSAIKSRGFTIEERGKTELRGYGALNTYFLVANEHATDDDLC
GRPRIGTQEISFINEGKEEKPSFDKKNKKAVQTPSSGIGSRPPTGDSEIVPFVY

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