Gene
| Gene Model ID | pfu_aug2.0_297.1_23824 |
|---|---|
| Locus | scaffold297.1 : 98916 ... 110919 : + |
| To GenomeBrowser | scaffold297.1:98916..110919 |
| Genes list of scaffold | scaffold297.1 |
| Synonym | pfu_aug1.0_1583.1_58579 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| calpain-5- partial | GO:0008233 GO:0044464 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_297.1_23824.t1 | 2 | 1 | Peptidase_C2 | 29 | 202 | 0.0 | 164.9 | 0.0 | 0.0 | 161.4 |
| pfu_aug2.0_297.1_23824.t1 | 1 | 1 | Calpain_III | 213 | 290 | 3.4e-19 | 68.9 | 2.1e-22 | 7.9e-19 | 67.7 |
| pfu_aug2.0_297.1_23824.t1 | 2 | 2 | Peptidase_C2 | 228 | 271 | 0.0 | 164.9 | 0.034 | 130.0 | 1.4 |
| pfu_aug2.0_297.1_23824.t1 | 1 | 1 | C2 | 314 | 390 | 2.4e-16 | 59.3 | 1.2e-19 | 4.6e-16 | 58.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_297.1_23824.t1 | gi|524908388|ref|XP_005109293.1| | PREDICTED: calpain-5-like, partial [Aplysia californica] | 0.0 |
| pfu_aug2.0_297.1_23824.t1 | gi|121583966|ref|NP_001073476.1| | calpain-5 [Danio rerio] | 0.0 |
| pfu_aug2.0_297.1_23824.t1 | gi|410909606|ref|XP_003968281.1| | PREDICTED: calpain-5 [Takifugu rubripes] | 0.0 |
| pfu_aug2.0_297.1_23824.t1 | gi|742082297|ref|XP_010868332.1| | PREDICTED: calpain-5 [Esox lucius] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_297.1_23824.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_297.1_23824.t1 atggacagggtgaaagggaaggggaggaaggggggcaggaggatggaggggaagaaaggggagggagggggttggaggag ggaactgtttggctgctacgaggcattggacggaggtgagctggtggaggcccttgaggactttactggaggtgttggtg aggtcattgacatggtgaaggaaaactactcaaacgacgcagagctcaaagcagcattgttcactcgtatgcagaaagaa gtagacaggaaaactctgatggcagcatctataccagctgagtcaagtgaggagatggaagcaaaaacagactcaggttt ggtcaagggacacgcctatggtattacagcagtcaaaaacgtgccccttgaggggtcgggattattcagcttctttaaca gggagaaaattcatatgatcagactgaggaatccctggggtgagggagaatggaaaggggctttcagtgatggatcaaaa gaatgggaaaagatatctcaaagtgacagagaaaagattggactgacttttgaagaggatggagagttttggatgacttt tgatgactactgtaaacattttgtacagacggctatatgtcgagtcgtcaacacctccatgttctctctgagtaaaacat ggtacgagggattgtcacacggagcctggaaaaagccagatagggccggagggtgtatcaataacctacaaacatttaca aacaatcctcagtttatgttagacatcacagattctgaagatgaacccttatttcacctgatgcagaaaacaacacgagc gactggcacaggcgagacaaacaacaccataggatttactatatttaaggtagaggacaataggagagaactaacgcttg acaagcctagtagaagtttattatgctgttgctgtattggagcccctaagatggtcacacaagtcaaagtactaaaggcc gagggactggcaaggcaagatgtctcaggagctgacccttactgtgttatttcgtgtgagggggagaaagtacggacaag gacagtagaggacaccacaaaccctgaatggaacgatacagctcttttctttaggaggaaacctttaaagaagcctatca aaatacagatttggaatcataacatactgaaggatcagtaccttggtaggcatgtgtttgttagtgctgatgaatgtaaa gacaagattatggcagtcgatctagtgggcaaagggcgaaacatggagaaaatgcccgctttgtatgtatcaagtctatt gttgatagcgtctcagttggtgtaa |
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Protein
| Protein ID | pfu_aug2.0_297.1_23824.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_297.1_23824.t1 MDRVKGKGRKGGRRMEGKKGEGGGWRRELFGCYEALDGGELVEALEDFTGGVGEVIDMVKENYSNDAELKAALFTRMQKE VDRKTLMAASIPAESSEEMEAKTDSGLVKGHAYGITAVKNVPLEGSGLFSFFNREKIHMIRLRNPWGEGEWKGAFSDGSK EWEKISQSDREKIGLTFEEDGEFWMTFDDYCKHFVQTAICRVVNTSMFSLSKTWYEGLSHGAWKKPDRAGGCINNLQTFT NNPQFMLDITDSEDEPLFHLMQKTTRATGTGETNNTIGFTIFKVEDNRRELTLDKPSRSLLCCCCIGAPKMVTQVKVLKA EGLARQDVSGADPYCVISCEGEKVRTRTVEDTTNPEWNDTALFFRRKPLKKPIKIQIWNHNILKDQYLGRHVFVSADECK DKIMAVDLVGKGRNMEKMPALYVSSLLLIASQLV |
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