Gene
| Gene Model ID | pfu_aug2.0_297.1_23825 |
|---|---|
| Locus | scaffold297.1 : 114547 ... 125425 : - |
| To GenomeBrowser | scaffold297.1:114547..125425 |
| Genes list of scaffold | scaffold297.1 |
| Synonym | pfu_aug1.0_1583.1_58580 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| 60s ribosomal protein l35a | GO:0000049 GO:0003735 GO:0005739 GO:0006364 GO:0006412 GO:0009790 GO:0016020 GO:0022625 GO:0042273 GO:0044822 GO:0070062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_297.1_23825.t1 | 1 | 1 | Ribosomal_L35Ae | 21 | 121 | 8.40779e-45 | 150.4 | 0.0 | 9.80909e-45 | 150.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_297.1_23825.t1 | gi|524896476|ref|XP_005104712.1| | PREDICTED: 60S ribosomal protein L35a-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_297.1_23825.t1 | gi|260796809|ref|XP_002593397.1| | hypothetical protein BRAFLDRAFT_277091 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_297.1_23825.t1 | gi|291237876|ref|XP_002738857.1| | PREDICTED: 60S ribosomal protein L35a-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_297.1_23825.t1 | gi|556982094|ref|XP_005997405.1| | PREDICTED: 60S ribosomal protein L35a isoform X1 [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_297.1_23825.t1 | gi|532039068|ref|XP_005362396.1| | PREDICTED: 60S ribosomal protein L35a-like [Microtus ochrogaster] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_297.1_23825.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_297.1_23825.t1 atggcagaatcttcccaagctactcagtcctcgggaaatccccccaagaaatcaggaagattgtactgtaaagctgtttt cactgggtacaaaagaggactgagaaatcaacatgagaacacagctttattgaaaattgaaggtgtgactgacaaggact cgacagacttttaccttggcaaacgttgtgcatacgtttacaaggccaaaaggaagacagcttgtcctggacatgataag ccaagtcgtatacgtgtaatctgggggaaaatcacaaggccacatggtaacagtggacaggtccgtgctaagttcaggaa gaatctgccttccactgctatgggcaaaagaatcagagttatgatgtacccatccagaatctaa |
|
Protein
| Protein ID | pfu_aug2.0_297.1_23825.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_297.1_23825.t1 MAESSQATQSSGNPPKKSGRLYCKAVFTGYKRGLRNQHENTALLKIEGVTDKDSTDFYLGKRCAYVYKAKRKTACPGHDK PSRIRVIWGKITRPHGNSGQVRAKFRKNLPSTAMGKRIRVMMYPSRI |
|