Gene
| Gene Model ID | pfu_aug2.0_297.1_23827 |
|---|---|
| Locus | scaffold297.1 : 149126 ... 164135 : + |
| To GenomeBrowser | scaffold297.1:149126..164135 |
| Genes list of scaffold | scaffold297.1 |
| Synonym | pfu_aug1.0_1583.1_58582 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_297.1_23827.t1 | 1 | 1 | TIMELESS | 23 | 233 | 3.3e-29 | 101.9 | 1.4e-32 | 1.1e-28 | 100.3 |
| pfu_aug2.0_297.1_23827.t1 | 3 | 1 | TIMELESS_C | 287 | 312 | 3.6e-07 | 29.5 | 0.94 | 7000.0 | -4.5 |
| pfu_aug2.0_297.1_23827.t1 | 3 | 2 | TIMELESS_C | 468 | 597 | 3.6e-07 | 29.5 | 7.0e-09 | 5.2e-05 | 22.3 |
| pfu_aug2.0_297.1_23827.t1 | 3 | 3 | TIMELESS_C | 568 | 781 | 3.6e-07 | 29.5 | 3.2e-07 | 0.0024 | 16.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_297.1_23827.t1 | gi|170041740|ref|XP_001848611.1| | timeless protein [Culex quinquefasciatus] | 0.0 |
| pfu_aug2.0_297.1_23827.t1 | gi|195471085|ref|XP_002087836.1| | tim [Drosophila yakuba] | 0.0 |
| pfu_aug2.0_297.1_23827.t1 | gi|442625726|ref|NP_001137780.2| | timeless, isoform R [Drosophila melanogaster] | 0.0 |
| pfu_aug2.0_297.1_23827.t1 | gi|45550927|ref|NP_722914.3| | timeless, isoform B [Drosophila melanogaster] | 0.0 |
| pfu_aug2.0_297.1_23827.t1 | gi|195434885|ref|XP_002065432.1| | GK14675 [Drosophila willistoni] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_297.1_23827.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_297.1_23827.t1 atggaatggcatattatgaatgtaggaggtataaatagtctatctggctcactgggatcggtagaggatggagaatttgt accgtcacagcattgtgaagactcgctcagtacgttgttatctcagataaaagacgaggatgccgcttacagaaatgttc gcagacaagtcttctacaacaaaatagtggaaacagaactgatgccaatgttgaaatatctcaaagatgacatcactctg tatgcccttgttatcaagttaatgtccgtattgacacagccggtggaatgtctcgtaaatgcgtctgtgtacagtacagt gccttcacaacccgtccatataccctggcagagagacttggagacctctctaagagcctataggaaactgtgcattgacg aggaactcctctgtgctgttatgacagaagtccagacaatactcactgataatgagggctgccgtctgtccgaggagagt tgtgatgtcatcacagatgtcctcctgctcctccgaaacctcctacacctcccagaggaaaacgaggacagcaaacaaaa tcaggaacaagaactctttttgaggatgttattccaatgtggacttacagatagggttatgagtctgttaaatctacgag agagggaggtgtggagtgttcccatggtacaaatgatttcgctactgtacaaaggccatgtgggtgaaatgttctgcaaa ggtcttgagatggaggaatcagccatgaatgccatcagatatgacgagtttgaaaatgacgttttctccaaatttgaaca tttaagtgaacttggcaatgacatggcaaacaatttatgtattgatgcagaaacagatcagagccagaacaagtccaagc cttcgtctgaatcgagttacagtgtaaagagcagcaaagaggagaatgatgacagactcaggaaacacttgctgaatttt acacatcagtttcttgagaagggcttcagtagcttagtgaatgacctgaagaaagttccgcttaaaacaatcaggacagt attcagtacaaagatatttgggtttttggtatatgaaggtgtttctaacatggagtacttgttaatagctcaacgcaaga aacaagatttggcaaatacactccgaaggattcacatgactgtagatgctctgagagaaatgttacagtttctgaaaatt tgtcaagaaaatacagaactggaggaagatgatatcatctatcttgatagacttaaaggtgacttgacagatatgtatga cctacgtcagtttttcctgctcctgacgcgatttgctactgtagaggtgatgaagaactatggagtgttggtagagaatg ttcagtacaataacctgatggtaaacaactgtttatttaccatgatgcatcacgtagcaggggattgtgggaagcctgaa gtgttgctacaggttcacatactcaagacatttctggatattagtgagaaggacatcattatgacacaggaaatggagga tctgatcgagtatgtgttacagacgtttgttttggcagctgaaaacaatcctctaacatgtgcaatgcagctctttggtg aagacaaacaacaagctacagcagaacaaagctctagtgaacaatcagtccatgaagacggctctaagatgacgtcagac ggagagagtgacacagataaatggacagaggaagaggaggatattttgatgatgttgtacacagagtatcaagaagactg tgactttgctcaaaagatcagatcaaagctggaggactttggtatagaaaaatctgttgatgagattgtggtatatttaa ctgtactgggatggataccctcagaacacaaggagaaagttagctctgaagaagattcaaaaagcaaatcaacttgtgag atggaccaatcagagaagccgttggaagattctgataacaaggatctctcctccttgaaagaatcggaagttattcctta ctgcatcaagcaattaaacaaagatggatttgattcatgtgttgaatggctaaagatgcagttctgtgaagtggcataca ccaaatatgtttccatgtacaacatatcaaccagtcaggagactgaggagcccatagctaagcactatgtggcccagaac aagtccgtccctttggttctgtacaatgagcttcaggaacatgtgattcacaacaaacacttcgtacgactaatatctaa cctgggtctacacatgccggaagacgtaggcatgatatttcccagaatccctcactggtggagcattcagcatctggtag acagtgctaggcagctaggtggaatccctatagatctgaagttcgatttgacagctttgaagcaagaatctgacgtacag agtgaagtgacagatgtacggatggaggaccctgttacctgtactacacacactcatctcaacagttacaagagattacc gaacacaatgtggatggacgtgatacagcaaattaacaaaactctggtaaatgagaaagtttatggagaagacagcaaaa atggcgacaacaaaaatggatgtttggaacaaattgctcttcaagtaaacaaggcagataggacttcagctatggagtgt ggggaataa |
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Protein
| Protein ID | pfu_aug2.0_297.1_23827.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_297.1_23827.t1 MEWHIMNVGGINSLSGSLGSVEDGEFVPSQHCEDSLSTLLSQIKDEDAAYRNVRRQVFYNKIVETELMPMLKYLKDDITL YALVIKLMSVLTQPVECLVNASVYSTVPSQPVHIPWQRDLETSLRAYRKLCIDEELLCAVMTEVQTILTDNEGCRLSEES CDVITDVLLLLRNLLHLPEENEDSKQNQEQELFLRMLFQCGLTDRVMSLLNLREREVWSVPMVQMISLLYKGHVGEMFCK GLEMEESAMNAIRYDEFENDVFSKFEHLSELGNDMANNLCIDAETDQSQNKSKPSSESSYSVKSSKEENDDRLRKHLLNF THQFLEKGFSSLVNDLKKVPLKTIRTVFSTKIFGFLVYEGVSNMEYLLIAQRKKQDLANTLRRIHMTVDALREMLQFLKI CQENTELEEDDIIYLDRLKGDLTDMYDLRQFFLLLTRFATVEVMKNYGVLVENVQYNNLMVNNCLFTMMHHVAGDCGKPE VLLQVHILKTFLDISEKDIIMTQEMEDLIEYVLQTFVLAAENNPLTCAMQLFGEDKQQATAEQSSSEQSVHEDGSKMTSD GESDTDKWTEEEEDILMMLYTEYQEDCDFAQKIRSKLEDFGIEKSVDEIVVYLTVLGWIPSEHKEKVSSEEDSKSKSTCE MDQSEKPLEDSDNKDLSSLKESEVIPYCIKQLNKDGFDSCVEWLKMQFCEVAYTKYVSMYNISTSQETEEPIAKHYVAQN KSVPLVLYNELQEHVIHNKHFVRLISNLGLHMPEDVGMIFPRIPHWWSIQHLVDSARQLGGIPIDLKFDLTALKQESDVQ SEVTDVRMEDPVTCTTHTHLNSYKRLPNTMWMDVIQQINKTLVNEKVYGEDSKNGDNKNGCLEQIALQVNKADRTSAMEC GE |
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