Gene
| Gene Model ID | pfu_aug2.0_297.1_23828 |
|---|---|
| Locus | scaffold297.1 : 167701 ... 188643 : - |
| To GenomeBrowser | scaffold297.1:167701..188643 |
| Genes list of scaffold | scaffold297.1 |
| Synonym | pfu_aug1.0_239766.1_72162 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| tetratricopeptide repeat protein 14 | GO:0005488 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_297.1_23828.t1 | 1 | 1 | S1 | 147 | 196 | 3.9e-06 | 26.8 | 1.5e-08 | 1.6e-05 | 24.9 |
| pfu_aug2.0_297.1_23828.t1 | 2 | 1 | TPR_11 | 246 | 309 | 3.0e-15 | 55.5 | 4.6e-16 | 4.9e-13 | 48.5 |
| pfu_aug2.0_297.1_23828.t1 | 3 | 1 | TPR_2 | 251 | 277 | 4.8e-14 | 51.0 | 8.7e-07 | 0.00092 | 18.9 |
| pfu_aug2.0_297.1_23828.t1 | 3 | 1 | TPR_1 | 251 | 277 | 1.1e-13 | 50.1 | 7.5e-08 | 7.9e-05 | 22.0 |
| pfu_aug2.0_297.1_23828.t1 | 3 | 1 | TPR_16 | 253 | 311 | 1.7e-06 | 28.5 | 1.3e-06 | 0.0014 | 19.2 |
| pfu_aug2.0_297.1_23828.t1 | 3 | 1 | TPR_14 | 254 | 286 | 1.6e-10 | 40.6 | 2.2e-05 | 0.023 | 15.3 |
| pfu_aug2.0_297.1_23828.t1 | 2 | 1 | TPR_9 | 254 | 316 | 5.2e-08 | 32.6 | 1.1e-09 | 1.2e-06 | 28.3 |
| pfu_aug2.0_297.1_23828.t1 | 3 | 1 | TPR_8 | 254 | 277 | 3.9e-07 | 29.3 | 3.9e-05 | 0.041 | 13.6 |
| pfu_aug2.0_297.1_23828.t1 | 3 | 1 | TPR_19 | 255 | 288 | 5.5e-07 | 29.8 | 2.1e-05 | 0.023 | 15.0 |
| pfu_aug2.0_297.1_23828.t1 | 3 | 2 | TPR_2 | 279 | 311 | 4.8e-14 | 51.0 | 6.6e-07 | 0.0007 | 19.3 |
| pfu_aug2.0_297.1_23828.t1 | 3 | 2 | TPR_1 | 279 | 311 | 1.1e-13 | 50.1 | 2.6e-07 | 0.00027 | 20.3 |
| pfu_aug2.0_297.1_23828.t1 | 3 | 2 | TPR_14 | 279 | 318 | 1.6e-10 | 40.6 | 0.00011 | 0.12 | 13.0 |
| pfu_aug2.0_297.1_23828.t1 | 3 | 2 | TPR_8 | 279 | 308 | 3.9e-07 | 29.3 | 0.0017 | 1.8 | 8.4 |
| pfu_aug2.0_297.1_23828.t1 | 3 | 2 | TPR_16 | 283 | 351 | 1.7e-06 | 28.5 | 8.1e-07 | 0.00086 | 19.9 |
| pfu_aug2.0_297.1_23828.t1 | 3 | 2 | TPR_19 | 291 | 325 | 5.5e-07 | 29.8 | 0.0014 | 1.5 | 9.1 |
| pfu_aug2.0_297.1_23828.t1 | 3 | 3 | TPR_2 | 320 | 351 | 4.8e-14 | 51.0 | 0.00034 | 0.36 | 10.8 |
| pfu_aug2.0_297.1_23828.t1 | 3 | 3 | TPR_14 | 320 | 359 | 1.6e-10 | 40.6 | 1.1e-05 | 0.012 | 16.2 |
| pfu_aug2.0_297.1_23828.t1 | 3 | 3 | TPR_8 | 321 | 350 | 3.9e-07 | 29.3 | 0.00076 | 0.8 | 9.6 |
| pfu_aug2.0_297.1_23828.t1 | 3 | 3 | TPR_1 | 329 | 351 | 1.1e-13 | 50.1 | 0.0012 | 1.3 | 8.8 |
| pfu_aug2.0_297.1_23828.t1 | 2 | 2 | TPR_9 | 329 | 356 | 5.2e-08 | 32.6 | 0.28 | 300.0 | 1.3 |
| pfu_aug2.0_297.1_23828.t1 | 2 | 2 | TPR_11 | 330 | 355 | 3.0e-15 | 55.5 | 0.0072 | 7.6 | 6.2 |
| pfu_aug2.0_297.1_23828.t1 | 3 | 3 | TPR_16 | 332 | 359 | 1.7e-06 | 28.5 | 0.0046 | 4.9 | 7.9 |
| pfu_aug2.0_297.1_23828.t1 | 3 | 3 | TPR_19 | 333 | 358 | 5.5e-07 | 29.8 | 0.029 | 30.0 | 5.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_297.1_23828.t1 | gi|524899297|ref|XP_005106083.1| | PREDICTED: tetratricopeptide repeat protein 14-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_297.1_23828.t1 | gi|241829150|ref|XP_002414745.1| | conserved hypothetical protein [Ixodes scapularis] | 0.0 |
| pfu_aug2.0_297.1_23828.t1 | gi|524931159|ref|XP_005069772.1| | PREDICTED: tetratricopeptide repeat protein 14 isoform X2 [Mesocricetus auratus] | 0.0 |
| pfu_aug2.0_297.1_23828.t1 | gi|594190978|ref|NP_001277429.1| | tetratricopeptide repeat protein 14 isoform c [Mus musculus] | 0.0 |
| pfu_aug2.0_297.1_23828.t1 | gi|50511215|dbj|BAD32593.1| | mKIAA1980 protein [Mus musculus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_297.1_23828.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_297.1_23828.t1 atggatgatgatctattaggcctagctgtccaattccatggaccagagttagtgagacaattacaaagagaacagccaac cgtacctgagaatgccttggattacctaccaagatataaaccacagacttaccagactggcataaaagaggatgctaaac ttggacttcagcgttttattgcaaagaaagcagactttctatttgcaccacaggatgaagattctaggagagatgtgctg gagttactggaggaagatgtaaaacctgtatcaagagactgttcaatggaaaatccagaaagctcacatatgacaggtag tctctttattcagagtctggagaaatatgacatagtgatatgtgtggttagtcaagtactagaaagtggacttggtctaa cattgctttgtatggacaatggaaaagcaagggatatagatgagtttggtatacatgcattctgtccagctaaagagtta cctaggcaactgtatcaaagtcccacggaaggtttcaaggttaaggataaagttaagggtttagtggtcaatgtgaatgc agaaacagagcgagtgacagtgtcactcaatgagaggtccctcagggaagaccaggaacacatcaaactgggtcatattt cagaggaagatttccctgttcattttagtgctgttataccagaaaaagaatgtgcagagagtctgagaaaacaccagtca cagagatgggcattccaatgtgtcgctgatggtataaagtacttcaaagctgggaagcagacagaggctttacagtacct aaacaaagccctacagatagatcctaccaatgtggaagccctggtggccaggggtgcactgtatgccaacaatgagagtt accatagagctataaaggattttgaaaatgccttggcagaaaatccaagtcatcagaatgccagaaagtacatgtttgaa actttgatggcccaatctaaagtacatgaggataaggaggagtttgctgatgctgagcagtatataagacaagctttgac tatccagcctgaatcagtggaagctagagaggcactcagatttatcttcttcagaaaggatgaacagaatagaagctcat tcctaagagagccagcacctagaaggaaggaggtcagcccagatagagagcacatgtctggatttgataaaacagccgtt acactgaaaaaactgattgacgaggatgaagaaaggagttcaagaaagaggaggaaatctcatcatagtgagaagaagag ctatgaaacagaacaaagtcctcacataaaacaagaaagatctccagacagacagagggcaaggtctccatacgacaggg gctcaccagagggcagggaaagaagaggatccccagagttacggggccgaggaagaatgaagtactcaccatcatactac catgaggcatacaaggagggggtggaggactcccctggtaaacagtatggtatcaaccatcaagcctcattcctcacaca tagtaagggaagcagtacattggaggaggaattcagactggcaaggtcaagctcgaaggatcacgctcaggatgcacaaa gacaatacaaggaggaaagaaaatacaagaaagagaagacacagaaagaaaaggtgaagcagagaagggatagtccatta cctaagaaaaggtcaaaacggtcaccatcttctagttcttcttatgacagtagcagtagttcatacagttctagtagttc tagctcttacagtaaagataagaggagaaagatggcaaaaaagaagcaagatcagagtggtattcaggagaaaagcaaga agtctcaacatgtgaaagatagagagtatagcgtagaccatgatgaccataggaaacctagcaagtcgggacatgtattg tcagatgaagaataccggtacgaaaagaaaaagtctgatctgaaagaaaggaaaacaaaagatttatcgccctccgagta tgatagtcaaagcaagagctactataaaaaacagaaaacaaagagtcgaagtagaagcaggagtatatcagagagtagaa aattgaaaggcaacagaaaggtgtccagagagagattacatagtcaaagctatagccccaggagacgatctaaggaaagg tacagaagccgaagttactcctcttcaagtcctgagtacagatcaaagcagagatccagaagtcctagttatgaattaaa gaaaaggtcaaaacctttgtctgatagcatgcaaaaacaggtggaatcagcaaaaacatataaagatagttacaaccgaa aatctagggatggatatgaaagtcccaggcaaaaatctaaagatagatatgaaagtcctaggcatgaatcgagagagagg tcattgagtcctagtcatggaaggaaagagcattccaagagtccagaactgacagaggaagaaaaaaagcagaaatacct ccaaatgaaaggatttaagaaaggatttatcatgaataagggctataaacaaggaaaatatacacaaagtaatagagata ggagttatagccgaagtaatagtagtggtagtgatcgtagcagaagcagggaaaaggaggcaagctgcagtagggagaga aaacctggtaacagcaaggagagatatagtgaccatagtaaagagaggcaacatgatcgcagtaaagagagacacagcca agagagggaaatagggtatatcagagaaaatgaaagaaaccagagtattggcaatgataaaggtcctggggataggggca aggaaaaagagatgatagaaaacctagagaagggaagtcgcaacgaaatagacaaaactgatactaaaggtggtcagtta catgtaggtgacaaaataaatgtatcgaaggagtctacaaataagaataagcctgcagagactgagagcaacataccaag ttcagctgtgggctcaaatgttgaagctgtcgaaattaaatccgttaatcctaaaactggcggcaatcttgcatctgcag aaaagacaaaggttcataagaatgtgaaaagtggaggtaaggaatcaagtgttgtcaaggaggtacacaaaaagaaaatt aaaccttcacaggacacaaaatcagatgctaggtctttaaatgaagttgtgcagtccagatgggatagccccagggatgc agattattacagtgatttgggtataaaggtggataaaaagaagaaaaagtccaggtttgatagtgacgagcaacatagag aaaggaagaatgttaaaaaagtgtctaatagaaaagatgataaggaaacaggggcttcccagtctgaaagaacaaaaagt aagcagaaacacactggtgaagaaaatattagtgagaggcccataaatccacctaatcaaagtacacaggtgtcgtatag acaagagggtgataatattattataaacaaggacttcatagacagagagccagaggatgtacatgaaaggtctccattag ggggcagtatgaaactgagggagcacctcaatcattcaccattaagaataaggatcgatagacctttacaagatgaaaga cagcctcctgtacaagaatacgctagaacttcacctgatatggatagagactttgaggggatcagaattcacatacataa tgacaagtatttggtcgacgcccatgggggaggtgatcagtatgatcctgccaatattgtgaatatgttacacagtgatg gaggcaggtttgataattcagagcagggtgatatgttgtatggtgaaggtgaaatggacatgcaggtgttagactcttat actgcatctagcagagaggagcatagaccgaaatataagcatagatctatggactcaagataccaaggtagaggtgatca ttcacgtgatcgattgcaaagggcagaagtgttgcagagctcaaaaattacatcaacttcagaaaatagattgtaccaaa gaagaacatctgggtcatcagacttcaggggaagacaagataatgtagaacataagggtgacaggagggattcagaatca agaaaatttcagagcaaaggtcgtaggtcaaggggaggatttaatcctagaggatcctttggttttagaaaggggtatga tcagaagtatcaaggaggtcagtcaaaatataggtcacggtctaggtctagatcaaggtcacgatctaggtcaaggtcaa gagataatcaaggtaggaaaacacctcttcttggtgttagtggtgcttattataataatacaaaaagcacaggaagaagc acaagtgtattgggattggggagtaatcagccatctacctatatccctagaagagatgagccaaccagcccaccaggcaa gtttggttctgtactacacaggaaggacccagggggtcaccctgacaggggtttccagtcctctaggaagcatagtccag ctactatgtcaaatcttgatgagatggaactgtttttgaatagactaaaagaaaataagaagggacaaagccaaggcagt agtaataagtga |
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Protein
| Protein ID | pfu_aug2.0_297.1_23828.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_297.1_23828.t1 MDDDLLGLAVQFHGPELVRQLQREQPTVPENALDYLPRYKPQTYQTGIKEDAKLGLQRFIAKKADFLFAPQDEDSRRDVL ELLEEDVKPVSRDCSMENPESSHMTGSLFIQSLEKYDIVICVVSQVLESGLGLTLLCMDNGKARDIDEFGIHAFCPAKEL PRQLYQSPTEGFKVKDKVKGLVVNVNAETERVTVSLNERSLREDQEHIKLGHISEEDFPVHFSAVIPEKECAESLRKHQS QRWAFQCVADGIKYFKAGKQTEALQYLNKALQIDPTNVEALVARGALYANNESYHRAIKDFENALAENPSHQNARKYMFE TLMAQSKVHEDKEEFADAEQYIRQALTIQPESVEAREALRFIFFRKDEQNRSSFLREPAPRRKEVSPDREHMSGFDKTAV TLKKLIDEDEERSSRKRRKSHHSEKKSYETEQSPHIKQERSPDRQRARSPYDRGSPEGRERRGSPELRGRGRMKYSPSYY HEAYKEGVEDSPGKQYGINHQASFLTHSKGSSTLEEEFRLARSSSKDHAQDAQRQYKEERKYKKEKTQKEKVKQRRDSPL PKKRSKRSPSSSSSYDSSSSSYSSSSSSSYSKDKRRKMAKKKQDQSGIQEKSKKSQHVKDREYSVDHDDHRKPSKSGHVL SDEEYRYEKKKSDLKERKTKDLSPSEYDSQSKSYYKKQKTKSRSRSRSISESRKLKGNRKVSRERLHSQSYSPRRRSKER YRSRSYSSSSPEYRSKQRSRSPSYELKKRSKPLSDSMQKQVESAKTYKDSYNRKSRDGYESPRQKSKDRYESPRHESRER SLSPSHGRKEHSKSPELTEEEKKQKYLQMKGFKKGFIMNKGYKQGKYTQSNRDRSYSRSNSSGSDRSRSREKEASCSRER KPGNSKERYSDHSKERQHDRSKERHSQEREIGYIRENERNQSIGNDKGPGDRGKEKEMIENLEKGSRNEIDKTDTKGGQL HVGDKINVSKESTNKNKPAETESNIPSSAVGSNVEAVEIKSVNPKTGGNLASAEKTKVHKNVKSGGKESSVVKEVHKKKI KPSQDTKSDARSLNEVVQSRWDSPRDADYYSDLGIKVDKKKKKSRFDSDEQHRERKNVKKVSNRKDDKETGASQSERTKS KQKHTGEENISERPINPPNQSTQVSYRQEGDNIIINKDFIDREPEDVHERSPLGGSMKLREHLNHSPLRIRIDRPLQDER QPPVQEYARTSPDMDRDFEGIRIHIHNDKYLVDAHGGGDQYDPANIVNMLHSDGGRFDNSEQGDMLYGEGEMDMQVLDSY TASSREEHRPKYKHRSMDSRYQGRGDHSRDRLQRAEVLQSSKITSTSENRLYQRRTSGSSDFRGRQDNVEHKGDRRDSES RKFQSKGRRSRGGFNPRGSFGFRKGYDQKYQGGQSKYRSRSRSRSRSRSRSRSRDNQGRKTPLLGVSGAYYNNTKSTGRS TSVLGLGSNQPSTYIPRRDEPTSPPGKFGSVLHRKDPGGHPDRGFQSSRKHSPATMSNLDEMELFLNRLKENKKGQSQGS SNK |
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