Gene
| Gene Model ID | pfu_aug2.0_298.1_27177 |
|---|---|
| Locus | scaffold298.1 : 1286 ... 17466 : + |
| To GenomeBrowser | scaffold298.1:1286..17466 |
| Genes list of scaffold | scaffold298.1 |
| Synonym | pfu_aug1.0_14930.1_46817 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_298.1_27177.t1 | 2 | 1 | DnaJ | 20 | 36 | 2.2e-12 | 46.5 | 1.8 | 6800.0 | -3.1 |
| pfu_aug2.0_298.1_27177.t1 | 2 | 2 | DnaJ | 52 | 96 | 2.2e-12 | 46.5 | 1.1e-15 | 4.0e-12 | 45.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_298.1_27177.t1 | gi|655851698|ref|XP_002716160.2| | PREDICTED: dnaJ homolog subfamily C member 8 [Oryctolagus cuniculus] | 3.0e-37 |
| pfu_aug2.0_298.1_27177.t1 | gi|507694827|ref|XP_004643023.1| | 4.0e-37 | |
| pfu_aug2.0_298.1_27177.t1 | gi|684406519|ref|XP_009174807.1| | hypothetical protein T265_15092, partial [Opisthorchis viverrini] | 6.0e-36 |
Transcript
| Transcript ID | pfu_aug2.0_298.1_27177.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_298.1_27177.t1 atgggtcctatggacccgatgaaatttgaccaatgggtcccaagccaaaacaatgggtcccaggtgaaagctatcgagca tagggattctgtcctcacatcaaaacaacagatagacaaactaaatcgacctggagccacatacttcaatttgaatccat ttgaggtacttgacatagatcctgagacctcattggctgatatcaagaagagatacagacagatgtccatattggtgcat ccagacaaaaatcaagatgatgttgatagagcacaaaaggcatttgaaggtaaatatttagagagaatgagaatagaaag ggaaacaagagaaatgcatgaaaggaaaagaaaagcagaggaagaggaagtggaagaagaaaagaagaaaactgaaaaag agtggcagaaaaactttgaggaaagcagagctggaagagtggatagctggagaaccttcaaaactggcaacaaaaaatcc aaaaacaaaggaatgttccgcccacccaagcccaaactggagaagagataa |
|
Protein
| Protein ID | pfu_aug2.0_298.1_27177.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_298.1_27177.t1 MGPMDPMKFDQWVPSQNNGSQVKAIEHRDSVLTSKQQIDKLNRPGATYFNLNPFEVLDIDPETSLADIKKRYRQMSILVH PDKNQDDVDRAQKAFEGKYLERMRIERETREMHERKRKAEEEEVEEEKKKTEKEWQKNFEESRAGRVDSWRTFKTGNKKS KNKGMFRPPKPKLEKR |
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