Gene
| Gene Model ID | pfu_aug2.0_298.1_27181 |
|---|---|
| Locus | scaffold298.1 : 113356 ... 130625 : + |
| To GenomeBrowser | scaffold298.1:113356..130625 |
| Genes list of scaffold | scaffold298.1 |
| Synonym | pfu_aug1.0_14941.1_61427 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_298.1_27181.t1 | 1 | 1 | adh_short | 17 | 168 | 2.0e-12 | 47.3 | 2.4e-15 | 6.0e-12 | 45.7 |
| pfu_aug2.0_298.1_27181.t1 | 1 | 1 | KR | 17 | 127 | 6.1e-06 | 26.0 | 3.7e-09 | 9.2e-06 | 25.4 |
| pfu_aug2.0_298.1_27181.t1 | 1 | 1 | adh_short_C2 | 25 | 162 | 1.9e-07 | 31.0 | 1.3e-10 | 3.2e-07 | 30.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_298.1_27181.t1 | gi|390351702|ref|XP_003727711.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_298.1_27181.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_298.1_27181.t1 atgggaaatagaccgagtattccagttgtcaaacttccgaggaccactgtcgccatagtaactggtgcaaacacaggtat cggatatgagacggctaaattcattgcaatgatgggagcgcatgttattctggcatgtcgagatgaacaaaaggcgaaac aggcaataaagaaaatgaatggtgaatttcaagatgaaaaagctgcgggtgctaaaaacattataagtgatgaacgacta agtctggagttcatgaaggtcgacttgtcgtcgttagaatcgacaaaggctttcatagatgcttttaaagcttctggaag gaaacttcatttacttgtttgcaatgctgcaatccattctcacacacaagtcatgacatcagacaacttcgaacttacat atcaggtgaattatctcagtcatttcctcatcactattagtctgctgccaataatgaagacttccggaagtgacgtcaga ataattcaagtctcaagcgaggctcataaacacgaaaagtttgacagaaagtatgctgaaaatggaaaaccagaggagta caacggttaccggtgctatgcaaacacaaaactgtttcagataatgtccatgtacacaatagacaagatgttgctagaca cagatatagagattgcgtgtgttaatccaggaataacagataccaaattatacagggaacatctcccagaagggagagaa ggcttcaaaagaacatgctataactgcatgggatgggtacagaccccaagaagaggcgctgcatgctccatttacgctgc cgttaacccagaactgaagggatgtagccgtggatactacatgaagtcacgatcagccccttcctttccaagttcagctg cacaggataaggatcttgcagaatttgttttggaatgcaccagagagaatctgaaaggattcctcacaccggagatcgac aaaatactcgacacgtag |
|
Protein
| Protein ID | pfu_aug2.0_298.1_27181.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_298.1_27181.t1 MGNRPSIPVVKLPRTTVAIVTGANTGIGYETAKFIAMMGAHVILACRDEQKAKQAIKKMNGEFQDEKAAGAKNIISDERL SLEFMKVDLSSLESTKAFIDAFKASGRKLHLLVCNAAIHSHTQVMTSDNFELTYQVNYLSHFLITISLLPIMKTSGSDVR IIQVSSEAHKHEKFDRKYAENGKPEEYNGYRCYANTKLFQIMSMYTIDKMLLDTDIEIACVNPGITDTKLYREHLPEGRE GFKRTCYNCMGWVQTPRRGAACSIYAAVNPELKGCSRGYYMKSRSAPSFPSSAAQDKDLAEFVLECTRENLKGFLTPEID KILDT |
|