Gene
| Gene Model ID | pfu_aug2.0_298.1_27182 |
|---|---|
| Locus | scaffold298.1 : 131282 ... 143895 : - |
| To GenomeBrowser | scaffold298.1:131282..143895 |
| Genes list of scaffold | scaffold298.1 |
| Synonym | pfu_aug1.0_3058.1_51863 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_298.1_27182.t1 | 1 | 1 | Miro | 35 | 129 | 3.0e-17 | 63.2 | 1.5e-19 | 2.8e-16 | 60.0 |
| pfu_aug2.0_298.1_27182.t1 | 1 | 1 | Ras | 36 | 205 | 4.2e-26 | 91.2 | 4.2e-29 | 7.7e-26 | 90.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_298.1_27182.t1 | gi|524893150|ref|XP_005103095.1| | PREDICTED: ras-related and estrogen-regulated growth inhibitor-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_298.1_27182.t1 | gi|676437517|ref|XP_009048230.1| | hypothetical protein LOTGIDRAFT_97342, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_298.1_27182.t1 | gi|125987351|ref|XP_001357438.1| | GA18698 [Drosophila pseudoobscura pseudoobscura] | 0.0 |
| pfu_aug2.0_298.1_27182.t1 | gi|195471519|ref|XP_002088050.1| | GE18361 [Drosophila yakuba] | 0.0 |
| pfu_aug2.0_298.1_27182.t1 | gi|195577279|ref|XP_002078500.1| | GD22497 [Drosophila simulans] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_298.1_27182.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_298.1_27182.t1 atggatagtattaacagttttctatcgagggacggtatgagaaacatgtcgtcaccacggctcttgcggaagttgtccat gaacaaccgtcagaaacctctcagaatagctgtcttaggacaaaatggagtcgggaaatcagctttaattgttcgtttca tcacacggagattcattggtgaatatgatccagaattagaaaaagtttacacatgcactcgttacctagatggtgataat gttacgttagaggtgctagatactgcagcccaggaagagaaaagcagaattgaggaacacataaaatgggcagacgcctt cattctgatgtactcagtaacagactcttgtagttttagtgaggtttgcagactcaaattccttataaacgcttatggca agcgccaacgaaaacatagtgcttctataccggaaacgaactctacagcgacacctgtggctttagttggtaatcaaatt gacagaccacgtgaccgaatggtttcagaagaggatggacgaagaaagtctattgatctcggatgtgttggtttctatga aatatcagtgagagaatccatagaaaatgtgtgtaaaatatttgaagacatttacgtcatgtgccggaaaccgagaaaat gtcggcaaatatgcaaacagttgtcacttccggcttttatagcagaagacagaactgatgaggacggcaatgaaacttca agtcttagcagacgacgaaaagctgtgttcacattgtcatag |
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Protein
| Protein ID | pfu_aug2.0_298.1_27182.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_298.1_27182.t1 MDSINSFLSRDGMRNMSSPRLLRKLSMNNRQKPLRIAVLGQNGVGKSALIVRFITRRFIGEYDPELEKVYTCTRYLDGDN VTLEVLDTAAQEEKSRIEEHIKWADAFILMYSVTDSCSFSEVCRLKFLINAYGKRQRKHSASIPETNSTATPVALVGNQI DRPRDRMVSEEDGRRKSIDLGCVGFYEISVRESIENVCKIFEDIYVMCRKPRKCRQICKQLSLPAFIAEDRTDEDGNETS SLSRRRKAVFTLS |
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