Gene
| Gene Model ID | pfu_aug2.0_298.1_27187 |
|---|---|
| Locus | scaffold298.1 : 222418 ... 229822 : + |
| To GenomeBrowser | scaffold298.1:222418..229822 |
| Genes list of scaffold | scaffold298.1 |
| Synonym | pfu_aug1.0_3058.1_51866 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_298.1_27187.t1 | 2 | 1 | ubiquitin | 441 | 498 | 1.4e-08 | 33.9 | 1.1e-10 | 1.6e-06 | 27.4 |
| pfu_aug2.0_298.1_27187.t1 | 2 | 2 | ubiquitin | 510 | 533 | 1.4e-08 | 33.9 | 0.0022 | 33.0 | 3.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_298.1_27187.t1 | gi|676485353|ref|XP_009063631.1| | hypothetical protein LOTGIDRAFT_229410 [Lottia gigantea] | 1.0e-10 |
| pfu_aug2.0_298.1_27187.t1 | gi|676485350|ref|XP_009063630.1| | hypothetical protein LOTGIDRAFT_154877 [Lottia gigantea] | 3.0e-09 |
Transcript
| Transcript ID | pfu_aug2.0_298.1_27187.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_298.1_27187.t1 atgaagataagaaaacatctgaagcagatttcaaggcaagaagtcgcagatttagaaatgacaacttgtaccgaagggac tgatacaggggatgactccgacactctgtttttgaaagatataccgttaggacagttctcagatgccggtacacctgtac gtacagatgtatttaacgttcgttttatcttattcaatgctcttgggtgtttggataaaactgttataggaacatttcaa gagcttcagcaagacattgatttcttgaaagatgatccagaagatcttatcaaagcacaagttgaaaaaacgttcaaagg aatcgtcagagtaggcatgtttggatcggttttaggaattcctccaactattcttaaagcacatctactaagaacgtgta aatggtatgctatcgtatatgatgaagaggaagattgcatatcagcaattctaccaaaaatggcattaggatcgtctata acagatgcattgtctaagcttaatggtgcttctgaactgaggtatatccgattttcgagaaacggtcacgtagaagatct tctttctgtcatagaagacgagataaacaaggaactggaagttgaaaataagcttcacttgtttcattcttcgaaaaagc tttttcctgaaaaatcccttttggacattccttcctcccctgaagttttcctcgttcctttgaaagaaagaaaaaaacat ttgaagattttgcactctgttgaccaaaacaaggacgaaatactgcatgtaaactgcttaacgactgactccgtattaga agtgaggaacaagtttcttcaagatcattttaaaggaaaagaaatcgataaaattgccgtatatttttcaaggcctctgt caaactctctcctgtccgacgatgatgcagttaacaaagctctgtacacaccgactcagaaaactgtgaaagatttctat ccaattgtttccggtagtgaatctgaggacgacgatctgtatagaatagttgatcttgtagctcatgtaggtgtcaaagg atgtattggtgttacggtgaaatataccaaaacacatcaatttcgaaagtcaaaatttgcactcattgacaaaaatggtt cttcggaatgtctacggcatcaaataggaactgttctacatcaagatcctttgtgtttgaagttatcaattggaggaaaa gatgttccggaaatgatgtcattagctggattaagggaactgaaatatggatgtacaatttttgtgaaagtcaaacctaa actggatctaagaatagaaggcgacaaacgggtagaaaggatggaagctaaaattatggaaaaagtttgtgacatcaagg aaagagtagctaaatccattcaactccctgttaagatgtttgatatgtctcatgcggggtcattgttgcatgaccattgt acacttaacgatcacaacattgagtcggaaacagtcttgcaaattgtctcgcatgagaaaagaattgaagtgaatgtaaa aatcatgacaggacaaaatataacaaatcttggaacaatgaaagatgcaggtattaaagacggtgatacaataacagtgt ctgctacaaagtctgaaacacctaagagagttctaactttaagaaaatcggacagtcatgacagcaacacatcagaatat ctaagtgcccacaatgactccgcttctgacagtggaagatatcgacattcgggagaagtatctgacaatggctcacttga tgttctcttccatagtgacgaagacattacaccggacggtttaaaagaaaacacaacgctgtcaagtactcttaaaagat atggcaaaagctcaatgtcggacacagaaataggccttcgacggaagcatgaagcaaaacgcccatccattgttcctttt gaggtaatggcaaagttgcctattaccttatcggatctactggatagtactatcgcgaagtctactttcccaggacaaag tgattgcagttcaataagggattatgatgaagcggacactttggaagaaaagttaaaacagaggagagaagcagggcatg tgaggtcatcttcagaaggacaaagagaaattatcatttcaaccaacattaaagctcaagtgacaagctctagaggagaa aagacaactctgagagaattcagtttcgtagaatcggacatttctaatggaaggacatctgtttcatcagaaacagaatc gtgcagaatgcagaatgataaaagaggtgatttttttcttttttaa |
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Protein
| Protein ID | pfu_aug2.0_298.1_27187.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_298.1_27187.t1 MKIRKHLKQISRQEVADLEMTTCTEGTDTGDDSDTLFLKDIPLGQFSDAGTPVRTDVFNVRFILFNALGCLDKTVIGTFQ ELQQDIDFLKDDPEDLIKAQVEKTFKGIVRVGMFGSVLGIPPTILKAHLLRTCKWYAIVYDEEEDCISAILPKMALGSSI TDALSKLNGASELRYIRFSRNGHVEDLLSVIEDEINKELEVENKLHLFHSSKKLFPEKSLLDIPSSPEVFLVPLKERKKH LKILHSVDQNKDEILHVNCLTTDSVLEVRNKFLQDHFKGKEIDKIAVYFSRPLSNSLLSDDDAVNKALYTPTQKTVKDFY PIVSGSESEDDDLYRIVDLVAHVGVKGCIGVTVKYTKTHQFRKSKFALIDKNGSSECLRHQIGTVLHQDPLCLKLSIGGK DVPEMMSLAGLRELKYGCTIFVKVKPKLDLRIEGDKRVERMEAKIMEKVCDIKERVAKSIQLPVKMFDMSHAGSLLHDHC TLNDHNIESETVLQIVSHEKRIEVNVKIMTGQNITNLGTMKDAGIKDGDTITVSATKSETPKRVLTLRKSDSHDSNTSEY LSAHNDSASDSGRYRHSGEVSDNGSLDVLFHSDEDITPDGLKENTTLSSTLKRYGKSSMSDTEIGLRRKHEAKRPSIVPF EVMAKLPITLSDLLDSTIAKSTFPGQSDCSSIRDYDEADTLEEKLKQRREAGHVRSSSEGQREIIISTNIKAQVTSSRGE KTTLREFSFVESDISNGRTSVSSETESCRMQNDKRGDFFLF |
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