Gene
| Gene Model ID | pfu_aug2.0_298.1_27190 |
|---|---|
| Locus | scaffold298.1 : 354900 ... 370824 : - |
| To GenomeBrowser | scaffold298.1:354900..370824 |
| Genes list of scaffold | scaffold298.1 |
| Synonym | pfu_aug1.0_85545.1_20633 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_298.1_27190.t1 | 1 | 1 | Cpn60_TCP1 | 19 | 496 | 0.0 | 429.2 | 0.0 | 0.0 | 426.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_298.1_27190.t1 | gi|676457265|ref|XP_009054593.1| | hypothetical protein LOTGIDRAFT_189106 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_298.1_27190.t1 | gi|524907151|ref|XP_005108701.1| | PREDICTED: T-complex protein 1 subunit theta-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_298.1_27190.t1 | gi|704589789|ref|XP_010191169.1| | PREDICTED: T-complex protein 1 subunit theta isoform X1 [Mesitornis unicolor] | 0.0 |
| pfu_aug2.0_298.1_27190.t1 | gi|669275439|ref|XP_008629907.1| | PREDICTED: T-complex protein 1 subunit theta isoform X2 [Corvus brachyrhynchos] | 0.0 |
| pfu_aug2.0_298.1_27190.t1 | gi|543741402|ref|XP_005511576.1| | PREDICTED: T-complex protein 1 subunit theta [Columba livia] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_298.1_27190.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_298.1_27190.t1 cattacagtggtctagatgaagcagtgtatagaaacatcgatgcttgtaaagagttggcaaagactacaagatcagcttt tggtccattaggtcagaacaaaatggtcatcaatcacttagaaaagctgtttgtaaccaatgacgcagctacaatattga gagaattagatgtccagcatccagcagcaaaaatggttgtcatggcgtcacatcaacaggaacaggaagttggggacggc acaaactttgtcctggtctttgccggtgctttactggaacatgcagagatgctccttcgtatgggtctttctgtcacaga agtaacagagggatatgaaatagcatgcaagaaagcgttagacatattaccagacttagtatgtggtgaacagaaaaacc tcagggataaagaaggtgtaactaaagtgatcaaaacagcagtaatgagcaaacagtatggaaatgaagacttcttagca aaactcatagcagaagcatgcatttctgtgctgtcaaagaaagtcacatttaatgtagataatgtaagagtatccaaaat attgggtgctggtgttcatgtgtccagtgtcatacagggtatggtgttcaaacggcaagtagaaggggagataacgaagg cagataaatgtaaaatcgctgtttactcctgtcctcttgatgttttacaaacagaaacaaaaggcacagttaagatcaca tcagcagaggagctaatgcagttcagtaaaggagaggaaactcaaatggaggagcaaatcaagggaatagcagactctgg ttgtactgttgtcgtggcaggaggtaaagtaggggagttagcccagcattactgtaacaaatacaaactgatggttatac gccttatgtcaaaatgggatctcaggagactgtgtcggtcaatagaggctacaccattaccaagagtcactccaccgaca gcagatgaggcaggtttctgtgaccatgtgtatgtagatgagataggagagactcctgtaattgtcttcaagcaagacaa agaagaaagcgccatatcaaccattgttatcagaggggcaacagataacattatagatgatatagagagagccgaatcaa gattagtgcctggagcaggggctacggaggtagaactggcaaagcaactgacaacgtatgctgaaagtacccctggatta gagcaatatgccattgagaagtttgccgagtccctagaagccatcccaagagcactggctgaaaatgcaggagccaaggc tacagaagtactatccaagctaaaggcagcccaccaagaaggaaagaagacatttggaatccatttagaagatccatcaa ttggtggattggatgctgtaaagaatgatttgttagatctctacatcaataagtactgggctctgaagtatgccaccgct gcagcctgtactgtactcaaagtagatcagatcataatggccaaaccagccggaggtccaaaggcaaaggaaaacagaga ctgggatgaagattaa |
|
Protein
| Protein ID | pfu_aug2.0_298.1_27190.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_298.1_27190.t1 HYSGLDEAVYRNIDACKELAKTTRSAFGPLGQNKMVINHLEKLFVTNDAATILRELDVQHPAAKMVVMASHQQEQEVGDG TNFVLVFAGALLEHAEMLLRMGLSVTEVTEGYEIACKKALDILPDLVCGEQKNLRDKEGVTKVIKTAVMSKQYGNEDFLA KLIAEACISVLSKKVTFNVDNVRVSKILGAGVHVSSVIQGMVFKRQVEGEITKADKCKIAVYSCPLDVLQTETKGTVKIT SAEELMQFSKGEETQMEEQIKGIADSGCTVVVAGGKVGELAQHYCNKYKLMVIRLMSKWDLRRLCRSIEATPLPRVTPPT ADEAGFCDHVYVDEIGETPVIVFKQDKEESAISTIVIRGATDNIIDDIERAESRLVPGAGATEVELAKQLTTYAESTPGL EQYAIEKFAESLEAIPRALAENAGAKATEVLSKLKAAHQEGKKTFGIHLEDPSIGGLDAVKNDLLDLYINKYWALKYATA AACTVLKVDQIIMAKPAGGPKAKENRDWDED |
|