Gene
| Gene Model ID | pfu_aug2.0_2988.1_29002 |
|---|---|
| Locus | scaffold2988.1 : 48576 ... 75933 : + |
| To GenomeBrowser | scaffold2988.1:48576..75933 |
| Genes list of scaffold | scaffold2988.1 |
| Synonym | pfu_aug1.0_1544.1_37049 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2988.1_29002.t1 | 6 | 1 | Sushi | 76 | 108 | 2.5e-32 | 110.9 | 1.7e-06 | 0.013 | 15.8 |
| pfu_aug2.0_2988.1_29002.t1 | 6 | 2 | Sushi | 113 | 162 | 2.5e-32 | 110.9 | 4.6e-07 | 0.0034 | 17.6 |
| pfu_aug2.0_2988.1_29002.t1 | 6 | 3 | Sushi | 170 | 220 | 2.5e-32 | 110.9 | 2.1e-09 | 1.6e-05 | 25.1 |
| pfu_aug2.0_2988.1_29002.t1 | 6 | 4 | Sushi | 229 | 278 | 2.5e-32 | 110.9 | 1.0e-08 | 7.5e-05 | 22.9 |
| pfu_aug2.0_2988.1_29002.t1 | 6 | 5 | Sushi | 287 | 338 | 2.5e-32 | 110.9 | 2.7e-10 | 2.0e-06 | 28.0 |
| pfu_aug2.0_2988.1_29002.t1 | 6 | 6 | Sushi | 346 | 395 | 2.5e-32 | 110.9 | 2.5e-09 | 1.9e-05 | 24.9 |
| pfu_aug2.0_2988.1_29002.t1 | 1 | 1 | MAM | 426 | 533 | 6.0e-12 | 45.6 | 1.3e-15 | 1.0e-11 | 44.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2988.1_29002.t1 | gi|742172445|ref|XP_010885984.1| | PREDICTED: sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 [Esox lucius] | 4.0e-30 |
Transcript
| Transcript ID | pfu_aug2.0_2988.1_29002.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2988.1_29002.t1 atgttgctactaatggaagggaagttagttatatggaagctgaaatcgtcacgcttgtcatacagtgagaacacagacaa atgtgacggagagaaatgtgaggaacatcatacatgcgtggatatgctggatgggacggattactgtgtgagaacagaat gtagtgctccacagtttgtgaatgtgatggaatctgccggtatggattttgttggaggtttgagatcattgacgtgtgat tacggatacgagctaatttatggagtgacgtcactaatcatgacgtgtaaatctaatggagaatggaatggcacagcaaa ctgctcagtcgaaatatgtcctgaacctttagcgcctagtaatgggatcatatttcccggagaaaacatcgtcggatcca cacgtaacgttcaatgtaatattggatatctcaatgtaggtgctcctcctacaattgaatgcttcaacaacagaacatgg accaactggactggctcttgtaaggcatgtgatgaccctaacaccattccatatgctgttatcagtgacggaaacgtaac agtaggaagtaataggacgtatgcctgtaacatcggttttgaagacaacggggaatcccccttaattacttgcaatgaat ctgctatgtggaccacgactgagttttcttgtagagttgttgaatgtgcagagccctcaccaccatctaatggcacaata ctacccggaaacaacactgtgggatcaacaagggtggtggagtgtgacactggttttgccctgatcggcggttcgccaac aatagaatgcctggtcagtcaacaaacttggtcggtctggacaggatcttgtgaagtctgtggtgagcccgagtcaattc aatatgctgttatatcagaaggggatcggacagttggaagtataaggatgtacatctgtatcacaggttatgaaggcaac ggggaatcccctaacataacatgtgacgataatgggctgtggacatcatcgctattttcttgcagccttattgactgtgg ttctcccccaaacattgctagtatgacattcgtatccaatggttccacttggctttctactgccgagtacttttgtagct atggatttgttgtgagcggaaacggaactatcgtctgctcttcatcaggagaatggtcctctacagagatctattgtacc gaaccttcaacagtcatctttgattttgaggatgatgaccagtacaactttgttagtccgggttatggttattggtcttt caaattaatgacgggtcaaacaaaatcatcatatactggaccaacaggggcctaccacggtacaaagtacagatacttcg agggaaccggtcctgaggccgatgatgtagctcgaatggagtccgatttctacttcagtgctgaagtgcactgtatagat ttcttctatagcatgtatggggaggacattggaacaatgagaattaaataccttgggtacggctcatatttagagactct cctttggagtgacacaggtgacaagcaggagccaacctggtttaatgccaatgtcacagtcaatgttacaaagaaattca ag |
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Protein
| Protein ID | pfu_aug2.0_2988.1_29002.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2988.1_29002.t1 MLLLMEGKLVIWKLKSSRLSYSENTDKCDGEKCEEHHTCVDMLDGTDYCVRTECSAPQFVNVMESAGMDFVGGLRSLTCD YGYELIYGVTSLIMTCKSNGEWNGTANCSVEICPEPLAPSNGIIFPGENIVGSTRNVQCNIGYLNVGAPPTIECFNNRTW TNWTGSCKACDDPNTIPYAVISDGNVTVGSNRTYACNIGFEDNGESPLITCNESAMWTTTEFSCRVVECAEPSPPSNGTI LPGNNTVGSTRVVECDTGFALIGGSPTIECLVSQQTWSVWTGSCEVCGEPESIQYAVISEGDRTVGSIRMYICITGYEGN GESPNITCDDNGLWTSSLFSCSLIDCGSPPNIASMTFVSNGSTWLSTAEYFCSYGFVVSGNGTIVCSSSGEWSSTEIYCT EPSTVIFDFEDDDQYNFVSPGYGYWSFKLMTGQTKSSYTGPTGAYHGTKYRYFEGTGPEADDVARMESDFYFSAEVHCID FFYSMYGEDIGTMRIKYLGYGSYLETLLWSDTGDKQEPTWFNANVTVNVTKKFK |
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