Gene
| Gene Model ID | pfu_aug2.0_3.1_10022 |
|---|---|
| Locus | scaffold3.1 : 28246 ... 32126 : + |
| To GenomeBrowser | scaffold3.1:28246..32126 |
| Genes list of scaffold | scaffold3.1 |
| Synonym | pfu_aug1.0_9603.1_31784 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3.1_10022.t1 | 2 | 1 | TPK_B1_binding | 60 | 65 | 2.2e-19 | 68.9 | 0.86 | 6300.0 | -3.1 |
| pfu_aug2.0_3.1_10022.t1 | 2 | 2 | TPK_B1_binding | 206 | 279 | 2.2e-19 | 68.9 | 8.5e-23 | 6.3e-19 | 67.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3.1_10022.t1 | gi|165972441|ref|NP_001107091.1| | uncharacterized protein LOC570025 [Danio rerio] | 4.0e-35 |
| pfu_aug2.0_3.1_10022.t1 | gi|688613446|ref|XP_009295527.1| | PREDICTED: uncharacterized protein LOC570025 isoform X3 [Danio rerio] | 5.0e-35 |
| pfu_aug2.0_3.1_10022.t1 | gi|688613449|ref|XP_009295528.1| | PREDICTED: uncharacterized protein LOC570025 isoform X4 [Danio rerio] | 5.0e-35 |
| pfu_aug2.0_3.1_10022.t1 | gi|528519182|ref|XP_005162572.1| | PREDICTED: uncharacterized protein LOC570025 isoform X2 [Danio rerio] | 6.0e-35 |
| pfu_aug2.0_3.1_10022.t1 | gi|528519180|ref|XP_005162571.1| | PREDICTED: uncharacterized protein LOC570025 isoform X1 [Danio rerio] | 6.0e-35 |
Transcript
| Transcript ID | pfu_aug2.0_3.1_10022.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3.1_10022.t1 atggcagattgtgatactctgaatatgtacctaaggcagttttatgcagaagtgcggacacagaaaggtgaaaaatactc taaaaatgctattgtgggcatccgtgcgggtattaacagatatttaacatcaccgccatattccaggaaaattaacatta tgaaagacaaggaatttatgacttctaatcacgctttacttggaatggtcaaagaaatgaaaagggatggtttagacaaa acgcaacacaaacaagcgattccgcaggcggatgtacagaaatgttatagttccggtgcattgagtgatgataatccgac cagcctacagttaaaagtttggtttgaactttcacttcatttgggaagacggggtagagagggtttatcacatttacaaa aaaatgcctttgaagtaaaagtggacgaaagtggcaatagttatgtacaaatgtgttataacgaagctgacaagacgcat catggaattgacagcaaagaaaatataaaaaatccaaggatgtacgcaacatgtttgagcaattgtccggtacagtcnat tatgcttgtgagaataatatgcacttaccccgtttgtaacatttgttataaaaatggcagtcataagatctacataacag acgagtacagtgtagactggtgtgggttaattcctatgggagctccatgtaaatgtatcaccactacaggcctcaaatgg aacctagaaaaccaaggcatgcagtttggagagctaattagtacatccaatatcccctcattccaaggagagggtgtggt cacaggtgtggtcacagtagataccgacgccccactactgtggactatgggatacaccatgaaggaataa |
|
Protein
| Protein ID | pfu_aug2.0_3.1_10022.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3.1_10022.t1 MADCDTLNMYLRQFYAEVRTQKGEKYSKNAIVGIRAGINRYLTSPPYSRKINIMKDKEFMTSNHALLGMVKEMKRDGLDK TQHKQAIPQADVQKCYSSGALSDDNPTSLQLKVWFELSLHLGRRGREGLSHLQKNAFEVKVDESGNSYVQMCYNEADKTH HGIDSKENIKNPRMYATCLSNCPVQXIMLVRIICTYPVCNICYKNGSHKIYITDEYSVDWCGLIPMGAPCKCITTTGLKW NLENQGMQFGELISTSNIPSFQGEGVVTGVVTVDTDAPLLWTMGYTMKE |
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