Gene
| Gene Model ID | pfu_aug2.0_3.1_10030 |
|---|---|
| Locus | scaffold3.1 : 237910 ... 243286 : + |
| To GenomeBrowser | scaffold3.1:237910..243286 |
| Genes list of scaffold | scaffold3.1 |
| Synonym | pfu_aug1.0_8293.1_09730 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ras-related protein rab-19 | GO:0005525 GO:0007264 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3.1_10030.t1 | 1 | 1 | Arf | 7 | 131 | 9.7e-07 | 28.1 | 1.1e-09 | 1.6e-06 | 27.5 |
| pfu_aug2.0_3.1_10030.t1 | 1 | 1 | Ras | 9 | 173 | 1.5e-35 | 122.0 | 1.1e-38 | 1.7e-35 | 121.8 |
| pfu_aug2.0_3.1_10030.t1 | 1 | 1 | Miro | 9 | 124 | 2.8e-14 | 53.6 | 3.4e-17 | 5.0e-14 | 52.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3.1_10030.t1 | gi|524879295|ref|XP_005096325.1| | PREDICTED: GTP-binding protein ypt1-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_3.1_10030.t1 | gi|676469222|ref|XP_009058462.1| | hypothetical protein LOTGIDRAFT_122732 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_3.1_10030.t1 | gi|751783055|ref|XP_011200761.1| | PREDICTED: ras-related protein Rab-19 [Bactrocera dorsalis] | 0.0 |
| pfu_aug2.0_3.1_10030.t1 | gi|498960482|ref|XP_004524647.1| | 0.0 | |
| pfu_aug2.0_3.1_10030.t1 | gi|125977532|ref|XP_001352799.1| | GA11338 [Drosophila pseudoobscura pseudoobscura] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_3.1_10030.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3.1_10030.t1 atggcgacggggccaccaaattataagataattctatgtggggaatacggagtagggaaaagttccatcttccgtcgttt catgaacgacacgttcaccacggagacggggaagaaatcaacgatgggcctggaccaaagctccagaacggttgatattg gcgatttagaagtcaagttgacactttgggacaccggcgggatggagaggatgagttttattggctccagttactaccgg ggtgcgcacgcagccttactgtgttacagcatacagaacaaagaaacatttaacgtgctatcacaatatatccttgacat tgttatgaacgctgaaggcgccaaaatattcctctgtggcaacatggcggattgcgaagaccaagaaaacaaagtgacag aagccgacatggagaactttgaacgcgagtgtggggacgtgctgtctgggatgtactctatttcgtgtaaagacaattct ggcgtcaacgagatgttcaaagacatggcacgcgtgctacatcagcacgccattggacgcatgacgcttcggcgggaatt aaatgtgataaaaccgggggaaaccccggaacaagacgctgaacaaaagaagaaatgctgtggatga |
|
Protein
| Protein ID | pfu_aug2.0_3.1_10030.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3.1_10030.t1 MATGPPNYKIILCGEYGVGKSSIFRRFMNDTFTTETGKKSTMGLDQSSRTVDIGDLEVKLTLWDTGGMERMSFIGSSYYR GAHAALLCYSIQNKETFNVLSQYILDIVMNAEGAKIFLCGNMADCEDQENKVTEADMENFERECGDVLSGMYSISCKDNS GVNEMFKDMARVLHQHAIGRMTLRRELNVIKPGETPEQDAEQKKKCCG |
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