Gene
| Gene Model ID | pfu_aug2.0_3.1_10040 |
|---|---|
| Locus | scaffold3.1 : 548782 ... 562489 : + |
| To GenomeBrowser | scaffold3.1:548782..562489 |
| Genes list of scaffold | scaffold3.1 |
| Synonym | pfu_aug1.0_2803.1_30254 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3.1_10040.t1 | 1 | 1 | Cupin_8 | 42 | 300 | 0.0 | 279.6 | 0.0 | 0.0 | 279.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3.1_10040.t1 | gi|742199816|ref|XP_010893114.1| | PREDICTED: jmjC domain-containing protein 7 isoform X1 [Esox lucius] | 0.0 |
| pfu_aug2.0_3.1_10040.t1 | gi|156396392|ref|XP_001637377.1| | predicted protein [Nematostella vectensis] | 0.0 |
| pfu_aug2.0_3.1_10040.t1 | gi|597776576|ref|XP_007251967.1| | PREDICTED: jmjC domain-containing protein 7-like isoform X1 [Astyanax mexicanus] | 0.0 |
| pfu_aug2.0_3.1_10040.t1 | gi|527251340|ref|XP_005143976.1| | PREDICTED: jmjC domain-containing protein 7 isoform X1 [Melopsittacus undulatus] | 0.0 |
| pfu_aug2.0_3.1_10040.t1 | gi|617444449|ref|XP_007566332.1| | PREDICTED: jmjC domain-containing protein 7 isoform X1 [Poecilia formosa] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_3.1_10040.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3.1_10040.t1 atgacagaggaggacaatagtcgacaaactatagaagaagctctatttgaactttctactgaagctagagacttatactt ggacaagacagtgcctgttctctcctctcggccttcacctctaacattttaccgagagtttgtgtcttcgaacaaaccgg tgatcataagaaattccctaaaacactggaaagctttacaaaaatgggacgctcagtatttcaggaaagttggcgttgga gacgtcgaggtgacggtggctgtcacacctaacggtctggccgacgccgtagcggaagacaagtttgtcatgccggagga gcgaaggatgaccttctccgaattcctggacattctcgaggaaccagaaaagcacaacggaatattttatattcaaaaac agaattcaaatctaacggaggaatttgcacatattataaatgatgttgaaagagaaattccttggggcacagaagccttt ggtgaatcaccagacgctgtcaacttttggatgggagatggacgcgcagtaacatcaatgcacagagatcactatgagaa cttgtactgcgtggtacgaggttggaagacctttatactgatcccacctacagatattccatatattccttatgatgatt atcagcctgccgtcttcaaggaaaccgatgatggtaaatttgatattgtcgtcaacgaaaactcagaaaaggtaccatgg atatcaatcgatcctctaaatccagacctagtaaggtaccctgattatgccaaagcacgtcccatagaggtgacagtaaa ggaaggtgaaatcctatacctaccctccctgtggttccatcatgtacggcaatctcatggatgtatagcagtgaattact ggtacgacatgaagtttgatataaagttctgctactataatctactgaaatccctgtccaagataaggaatcaaacaaag ctaggcagttga |
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Protein
| Protein ID | pfu_aug2.0_3.1_10040.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3.1_10040.t1 MTEEDNSRQTIEEALFELSTEARDLYLDKTVPVLSSRPSPLTFYREFVSSNKPVIIRNSLKHWKALQKWDAQYFRKVGVG DVEVTVAVTPNGLADAVAEDKFVMPEERRMTFSEFLDILEEPEKHNGIFYIQKQNSNLTEEFAHIINDVEREIPWGTEAF GESPDAVNFWMGDGRAVTSMHRDHYENLYCVVRGWKTFILIPPTDIPYIPYDDYQPAVFKETDDGKFDIVVNENSEKVPW ISIDPLNPDLVRYPDYAKARPIEVTVKEGEILYLPSLWFHHVRQSHGCIAVNYWYDMKFDIKFCYYNLLKSLSKIRNQTK LGS |
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