Gene
| Gene Model ID | pfu_aug2.0_3.1_10041 |
|---|---|
| Locus | scaffold3.1 : 562952 ... 574330 : + |
| To GenomeBrowser | scaffold3.1:562952..574330 |
| Genes list of scaffold | scaffold3.1 |
| Synonym | pfu_aug1.0_2803.1_30250 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3.1_10041.t1 | 2 | 1 | CH | 86 | 185 | 3.5e-12 | 46.3 | 2.9e-15 | 1.4e-11 | 44.3 |
| pfu_aug2.0_3.1_10041.t1 | 2 | 1 | Filamin | 205 | 357 | 1.7e-22 | 79.8 | 6.3e-14 | 3.1e-10 | 40.5 |
| pfu_aug2.0_3.1_10041.t1 | 2 | 2 | CH | 855 | 878 | 3.5e-12 | 46.3 | 1.1 | 5400.0 | -2.6 |
| pfu_aug2.0_3.1_10041.t1 | 2 | 2 | Filamin | 1493 | 1578 | 1.7e-22 | 79.8 | 1.3e-12 | 6.3e-09 | 36.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3.1_10041.t1 | gi|524888149|ref|XP_005100650.1| | PREDICTED: uncharacterized protein LOC101845105 [Aplysia californica] | 0.0 |
| pfu_aug2.0_3.1_10041.t1 | gi|260820399|ref|XP_002605522.1| | hypothetical protein BRAFLDRAFT_104088 [Branchiostoma floridae] | 3.0e-29 |
| pfu_aug2.0_3.1_10041.t1 | gi|242000136|ref|XP_002434711.1| | Filamin-C, putative [Ixodes scapularis] | 2.0e-14 |
| pfu_aug2.0_3.1_10041.t1 | gi|156406478|ref|XP_001641072.1| | predicted protein [Nematostella vectensis] | 3.0e-14 |
| pfu_aug2.0_3.1_10041.t1 | gi|241696879|ref|XP_002413100.1| | hypothetical protein IscW_ISCW012391 [Ixodes scapularis] | 1.0e-13 |
Transcript
| Transcript ID | pfu_aug2.0_3.1_10041.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3.1_10041.t1 atgaaacatcggagacgatcgctggcactgcggcgaaatgaatccctgctgtcgttggcttgggtggtcatcagtaatgt tgccacacttcttgtccgttacatgatggctgtacgccacctaaatcctgtgaagttaatccgtgataagcagaagcgta tctactatacagacgcccacggtgttgtaccagtttatccacgatggtcagagagacttgtcaacctggttattagcgac aacaggaggtatagaaacattctgcaatgggtacaacggaatctaccaaatcacagcattacgaatttcacttcgtcttg gcacgatggcatcgttctttgttcactgctagaggccctacaaccaggggtgtgtccagggagtggtcatctaaaacacc ataacagagtcaataattgtcgcctcggtatacgattggctacccagtcccttgggttaccccaggacatgatcctcccc gaggagatggctattgctgacaagactacagaactaaagatactgaaatatgtatctatgatcaaatgggcagcagaaaa caaagcctttacgaatgaaatgaaaaacgaaatgacctgtgccaagaagatgacgtcatgcgttgcaaagggtagtggtt tggaagctggtattataggcaagaaaatgagattcactctgcttgtgacagatgtagttggcatgttccatctaaacata gatattaagggaccaaagaatgagatctataatgagacaataatcagccttcgtcaatcgtctgacttacatcaagataa cagctctactgcattgattaaggaccgtaacccaaatccctccatagacgagagagtaatggaattcatagaagatggat ttggcaacagctacgtacggtggaagaatataaaacattttgacgagacggctgtttatgatgccattccgtttcactgt ctttgtaatggagagaacacgttcttaatggggtatacaccagggtccgctggaatccacacagtctcaattcgatggca gaatggtcatataaatgggtctccattcaaggtaaaggtgtatcagcctcttgatgcaaccaaaagaagcgtgaaagaac cgaccgataaattactaaaattcagtgcgttttcattgtcgtcaatagaggagaaaggagggtctctggatatgatagag gttgatagtccaagcggagaccataacatacaaacaaatagtgacaaacaaaaccgatcacatagactgaccacaaagtt cagaaaagaattcacggtcacaaaaaggagagtaaaaagaaaggtggtgagtagaaatggcgaggagatagtcatttacg aatccccttccccgaccttatccagacagagcagtatgacggattcttctactgaagatgaaaatcgaagacgatcaaga tcaacttctcccccctcaagctcctttgtacctcatgggcgactttctgcagtaaaacggaaatctacaactgataatga tattttggacgatgataatttgcgtcaagcttcccaaacatcatctagttccaatggtgtgcttactgagaatgaatctg aaggtcatgagggtcaaaagcatagtcatttgcagagtatagtgtcacgggttggtacatttagaaaaatcattgaggaa aaaagaccagagaagctaaatcaaagcacgacagacgactcatcagaaagtcaaccatataaccacgattggaacaatga ttcagaaaaggtaattaatgtaaccattcaaagatcagcatcagatagtgcattaacaagaccaattgataatgctctac tcaaacacaaagctagagatctgaaacacgcacggcaaagaggccaaaagcttgacatgaatgagacggcctccttctat tccagtaaaatcgaaactgctaattccagttctatagaattaaggaaactgaataggtcttggtgtgagaaagacgatcg tgttttatataatccgttgagtagcgtttcatcaacgagtagtactacctcaaactcctcactagagttaaaacagaaaa ctcctctttgtggtgtacactctttaccaactctggacagtatagttgattctgaacagcaaaacatgcttaggttgaag aagatgattcgaaagaacccgagaattgtcgattcggtgcgccggaaaagtcgtgatgggttcgggcaaaagatagaaaa tacttcatcttcttcaaaagcgtcttacgaacacaccaatgaatatattcagaacgaagtcaattctgcaagaaggcaca atggcatgacttcaccgaaacccaaacccgacacatatttgatatatccagaatcaaatagaactgaaacgacggaaagt ccatatatgaccggggattccgtggagaagcaaatccatccagttgagcctcttgagttcaataaggatgaaaaatcttc tttcgacccagaaggccgtataaataatctacacggacttcctggatactcgacaggtggtaccaggaggtgtcgacgaa gggaatctatgctgaaatggatagaagatcaaaccttgacaactggcgtccacagcgaagacaccattagtgcgacgggc tttgtggatgatgaaatattaggcgtaaaatcaaatgtcatacgacaaggggactacagagaacatcccaaggatctctc tgtttctgagaacgaccagacagcaaaacaggggcaaactagtaaggcaaataaagttcatttcgacgaaagtaaatttt gcacaaagacaatagaatactattccccctctttcgatggagttgaaaatcctctgcgaaaagtgggtttacaaagacaa atgagcgtcagaagtttaaacagcaagtcatcggtatatgatacagtttgtccagaccaaaagggaattcagtcaatatc gactgattcctcagaaaacacagatttgcttgtgaaaggaagagggatgacgttagtgggaaggacggatcgtgcaaccc aagtacttgcaaacgaaatattacaggagactaaatacctttctttcttatgcaattttaacataagacggagaaagaac tgtattaagatgccgttaaaaagtgacagtaggactgactccctgacgcgatgctttcgaccaagatccctctcctctga cacaagccacgaacatttatttgaatacagaagacgtttcattcaaggtgatcgcacgaaccttggtgccttttcggatt atggtttggatggacaggaaaatcatactgacagtgtggattttccgatgcgacagtcaacgatagacacgattgatagt ggcatcgcagatgaaacaagtatgaagtcaattcaaacgagtccttatttcgccgatgatgagcatagaagtttaaacag gcaccagaaattgtttcgaaaaccatacaggggaaacatcttcttggatccaaaattagtgatgagcaacagtaacagaa attcgccgtgtagcgataaaggatccgatgaacattctttcgaatcttccgtagagagatcaaatttcgaacacggagtt tcttcaagaaaatccagaagaaaggcatcacacaagaaggaccataatggggattttaccagcttatctgacactgaagt aacaaatgcatcaaaggcaaagttctcaatttcaaaatatcttagtccaaccattaataaagagaaagaaaacatatcta ctgaagtgccgacatcacctagcgacataccagaaacacccaaagtgccacatacatcgaaaataggaatttggtgtaca gcttgttctaaggacgagtctatcaatgagagtaaatcaagcaccgatgaaccaggtgatctatatggtctttcaacaaa ctctcgtaacacgttgttggataatttagcgaactttcgaaatttggtcgtttcgcctttccgaggtttagacggaggga tcggctcggaattttcatcgcctttgaattcgccccgtttcaactcggagagtaatcattcctgtgggatgaactctcaa actacgttctcatctgaaatttccagaatcatcaagcctgtcctcttctcgttcacaaatgcatcaagtgtgactcgttt tgatgagatcaagcctgggcactatgtttcttctattgaaaacatgttcttgcccatctctgttggctcatcaaaatcag gctctggcagctcttacttagacgtctcctcgagttcatcgagcgaacaaaagagttctctagagaagaatttaagtgtg aaaagcccagacagccgtgtttcctctccactgtcccaagggagcaaacttggcactctgagcgattcgtcaattttctc cgatatggaaaaggatgacgtcctctcagatagaaaattgatcattgacaaagatgatgacagcgatgacgatgatggtg aatgtaaagctgagggtttgggtctaacacaaggacaagttggagtgaaaaataacttccaggtatgggtagagtctagc agaaacagttctctatcagtaaccatacatggaccacgtccacatactgtgttagaatccagcgtagtttacactggtga caatctctatgaagttgttttcgaggtttcccatcccggatattacgtcatttgtctgcgatgggcaggaaaagaaatcc aagatagcccttacttatgtagagtgacatattaa |
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Protein
| Protein ID | pfu_aug2.0_3.1_10041.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3.1_10041.t1 MKHRRRSLALRRNESLLSLAWVVISNVATLLVRYMMAVRHLNPVKLIRDKQKRIYYTDAHGVVPVYPRWSERLVNLVISD NRRYRNILQWVQRNLPNHSITNFTSSWHDGIVLCSLLEALQPGVCPGSGHLKHHNRVNNCRLGIRLATQSLGLPQDMILP EEMAIADKTTELKILKYVSMIKWAAENKAFTNEMKNEMTCAKKMTSCVAKGSGLEAGIIGKKMRFTLLVTDVVGMFHLNI DIKGPKNEIYNETIISLRQSSDLHQDNSSTALIKDRNPNPSIDERVMEFIEDGFGNSYVRWKNIKHFDETAVYDAIPFHC LCNGENTFLMGYTPGSAGIHTVSIRWQNGHINGSPFKVKVYQPLDATKRSVKEPTDKLLKFSAFSLSSIEEKGGSLDMIE VDSPSGDHNIQTNSDKQNRSHRLTTKFRKEFTVTKRRVKRKVVSRNGEEIVIYESPSPTLSRQSSMTDSSTEDENRRRSR STSPPSSSFVPHGRLSAVKRKSTTDNDILDDDNLRQASQTSSSSNGVLTENESEGHEGQKHSHLQSIVSRVGTFRKIIEE KRPEKLNQSTTDDSSESQPYNHDWNNDSEKVINVTIQRSASDSALTRPIDNALLKHKARDLKHARQRGQKLDMNETASFY SSKIETANSSSIELRKLNRSWCEKDDRVLYNPLSSVSSTSSTTSNSSLELKQKTPLCGVHSLPTLDSIVDSEQQNMLRLK KMIRKNPRIVDSVRRKSRDGFGQKIENTSSSSKASYEHTNEYIQNEVNSARRHNGMTSPKPKPDTYLIYPESNRTETTES PYMTGDSVEKQIHPVEPLEFNKDEKSSFDPEGRINNLHGLPGYSTGGTRRCRRRESMLKWIEDQTLTTGVHSEDTISATG FVDDEILGVKSNVIRQGDYREHPKDLSVSENDQTAKQGQTSKANKVHFDESKFCTKTIEYYSPSFDGVENPLRKVGLQRQ MSVRSLNSKSSVYDTVCPDQKGIQSISTDSSENTDLLVKGRGMTLVGRTDRATQVLANEILQETKYLSFLCNFNIRRRKN CIKMPLKSDSRTDSLTRCFRPRSLSSDTSHEHLFEYRRRFIQGDRTNLGAFSDYGLDGQENHTDSVDFPMRQSTIDTIDS GIADETSMKSIQTSPYFADDEHRSLNRHQKLFRKPYRGNIFLDPKLVMSNSNRNSPCSDKGSDEHSFESSVERSNFEHGV SSRKSRRKASHKKDHNGDFTSLSDTEVTNASKAKFSISKYLSPTINKEKENISTEVPTSPSDIPETPKVPHTSKIGIWCT ACSKDESINESKSSTDEPGDLYGLSTNSRNTLLDNLANFRNLVVSPFRGLDGGIGSEFSSPLNSPRFNSESNHSCGMNSQ TTFSSEISRIIKPVLFSFTNASSVTRFDEIKPGHYVSSIENMFLPISVGSSKSGSGSSYLDVSSSSSSEQKSSLEKNLSV KSPDSRVSSPLSQGSKLGTLSDSSIFSDMEKDDVLSDRKLIIDKDDDSDDDDGECKAEGLGLTQGQVGVKNNFQVWVESS RNSSLSVTIHGPRPHTVLESSVVYTGDNLYEVVFEVSHPGYYVICLRWAGKEIQDSPYLCRVTY |
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