Gene
| Gene Model ID | pfu_aug2.0_3.1_10042 |
|---|---|
| Locus | scaffold3.1 : 574562 ... 580311 : - |
| To GenomeBrowser | scaffold3.1:574562..580311 |
| Genes list of scaffold | scaffold3.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| transmembrane protease serine 3 isoform x2 | GO:0008233 GO:0044464 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3.1_10042.t1 | 1 | 1 | Trypsin | 86 | 312 | 0.0 | 222.6 | 0.0 | 0.0 | 222.3 |
| pfu_aug2.0_3.1_10042.t1 | 1 | 1 | DUF1986 | 96 | 203 | 4.5e-06 | 26.1 | 1.2e-09 | 5.9e-06 | 25.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3.1_10042.t1 | gi|524917145|ref|XP_005113336.1| | PREDICTED: transmembrane protease serine 9-like, partial [Aplysia californica] | 0.0 |
| pfu_aug2.0_3.1_10042.t1 | gi|731242998|ref|XP_010634784.1| | PREDICTED: transmembrane protease serine 3 isoform X2 [Fukomys damarensis] | 0.0 |
| pfu_aug2.0_3.1_10042.t1 | gi|731242996|ref|XP_010634783.1| | PREDICTED: transmembrane protease serine 3 isoform X1 [Fukomys damarensis] | 0.0 |
| pfu_aug2.0_3.1_10042.t1 | gi|260824469|ref|XP_002607190.1| | hypothetical protein BRAFLDRAFT_57333 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_3.1_10042.t1 | gi|395851126|ref|XP_003798117.1| | PREDICTED: transmembrane protease serine 3 isoform X1 [Otolemur garnettii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_3.1_10042.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3.1_10042.t1 atgggatcattcagaactccgctactactggttcttctcctggcatgtggtgaagctcaagatctttgccatgaacgtta tggaggcacatgtgttaacatgtactacaactcctgcctctcgggacattactattcaaccaatggctgtgcattccagg aaatgtgctgtatccctccaaagcacaccatttacccacctctaaaacaaggtcagtgtggtgtgagcacaccagtaccc gagagacaaactaagatagttggtgggaagatcgcagctcccggggagtttccatggcaggtttcaatgagatccaatgg tcatcatgtatgtggtggtatcatggtaggggaccaatgggtcatgactgccgcacattgcttcaaaaccaataagaatc cctatgcctggacagtggtccttggagagcatgatagagctgtcttagagggatacgagatccttgagaaagtggaaacc cttttcattcactcccactttgaccctgcacagttcctcaacgacattgccctgataaagcttggtaatcctgtgacggt agacacagcctacgtccgtcctgtatgtatacccaataagaacgagagcttcgatggaatgatttgtaccatcaccggat ggggtgcctcgcatagtggtggggttggaacacacaatctatacaaagctgatgtaccattgttatcaaacgaagtctgc tcgtatctgatggacaggaccatacccaacaccgagttgtgtgcaggaagaaaacgcggtggtgtcgattcttgtcaggg cgattcgggtggtccaatggtctgcaagaagaatggtgtgtggaacatcgtgggaatagtctcctgggggtattcatgtg cacaggcgtacactcctggtgtctacacacgtgtacagtcgtaccttgactgggtccattcagtgatgtcatattacgga agtcatccatctcagaagcggggactccactatgtgtag |
|
Protein
| Protein ID | pfu_aug2.0_3.1_10042.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3.1_10042.t1 MGSFRTPLLLVLLLACGEAQDLCHERYGGTCVNMYYNSCLSGHYYSTNGCAFQEMCCIPPKHTIYPPLKQGQCGVSTPVP ERQTKIVGGKIAAPGEFPWQVSMRSNGHHVCGGIMVGDQWVMTAAHCFKTNKNPYAWTVVLGEHDRAVLEGYEILEKVET LFIHSHFDPAQFLNDIALIKLGNPVTVDTAYVRPVCIPNKNESFDGMICTITGWGASHSGGVGTHNLYKADVPLLSNEVC SYLMDRTIPNTELCAGRKRGGVDSCQGDSGGPMVCKKNGVWNIVGIVSWGYSCAQAYTPGVYTRVQSYLDWVHSVMSYYG SHPSQKRGLHYV |
|