Gene
| Gene Model ID | pfu_aug2.0_3.1_10045 |
|---|---|
| Locus | scaffold3.1 : 620442 ... 622195 : + |
| To GenomeBrowser | scaffold3.1:620442..622195 |
| Genes list of scaffold | scaffold3.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| cathepsin l | GO:0016787 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3.1_10045.t1 | 1 | 1 | Inhibitor_I29 | 25 | 84 | 4.6e-12 | 46.0 | 1.0e-15 | 7.4e-12 | 45.3 |
| pfu_aug2.0_3.1_10045.t1 | 1 | 1 | Peptidase_C1 | 109 | 166 | 2.3e-24 | 86.5 | 4.8e-28 | 3.5e-24 | 85.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3.1_10045.t1 | gi|392881548|gb|AFM89606.1| | cathepsin L [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_3.1_10045.t1 | gi|148224022|ref|NP_001087489.1| | cathepsin L2 precursor [Xenopus laevis] | 0.0 |
| pfu_aug2.0_3.1_10045.t1 | gi|632979048|ref|XP_007906251.1| | PREDICTED: cathepsin L1 [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_3.1_10045.t1 | gi|392873948|gb|AFM85806.1| | cathepsin L [Callorhinchus milii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_3.1_10045.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3.1_10045.t1 atgctgcggttgacaatctttgtagttctgtatatctccatatcagcttttgacgtcaatttgaacaatgaatgggaaaa gtttaaggtggagttcaacagaaattacatgccaagtgaagaaagtatcagacgttcaatatgggaaggtcacatcagac tgatagagaaacacaacctggaggcagatctaggcctccatacatatcgtctggggatgaatgactttggagatctgtct aacgaagagtttagacagatgatgaatggatacgtaatgcgtaataccaccagcgagaacgtattcactgccacagggaa cgctttaccagaaacagtggactggagaacgcaaggatacgtcaccggtattaaaaatcagggtcaatgtgggtcatgct gggccttctccaccacggggtcattggaaggtcaacatttcaaggccacaggaaacctagtgtccttgtccgagcagaat ctcgtcgactgctccgctgccgaagaagatagagatacttttctgtag |
|
Protein
| Protein ID | pfu_aug2.0_3.1_10045.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3.1_10045.t1 MLRLTIFVVLYISISAFDVNLNNEWEKFKVEFNRNYMPSEESIRRSIWEGHIRLIEKHNLEADLGLHTYRLGMNDFGDLS NEEFRQMMNGYVMRNTTSENVFTATGNALPETVDWRTQGYVTGIKNQGQCGSCWAFSTTGSLEGQHFKATGNLVSLSEQN LVDCSAAEEDRDTFL |
|