Gene
| Gene Model ID | pfu_aug2.0_3.1_10046 |
|---|---|
| Locus | scaffold3.1 : 622702 ... 637181 : - |
| To GenomeBrowser | scaffold3.1:622702..637181 |
| Genes list of scaffold | scaffold3.1 |
| Synonym | pfu_aug1.0_6467.1_31209 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3.1_10046.t1 | 2 | 1 | Dymeclin | 1 | 453 | 0.0 | 494.7 | 0.0 | 0.0 | 334.9 |
| pfu_aug2.0_3.1_10046.t1 | 2 | 2 | Dymeclin | 454 | 618 | 0.0 | 494.7 | 0.0 | 0.0 | 161.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3.1_10046.t1 | gi|291222333|ref|XP_002731175.1| | PREDICTED: dymeclin-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_3.1_10046.t1 | gi|390334804|ref|XP_783417.2| | 0.0 | |
| pfu_aug2.0_3.1_10046.t1 | gi|719760105|ref|XP_010216057.1| | PREDICTED: dymeclin isoform X1 [Tinamus guttatus] | 0.0 |
| pfu_aug2.0_3.1_10046.t1 | gi|701360268|ref|XP_010006194.1| | PREDICTED: dymeclin [Chaetura pelagica] | 0.0 |
| pfu_aug2.0_3.1_10046.t1 | gi|696994383|ref|XP_009564084.1| | PREDICTED: dymeclin [Cuculus canorus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_3.1_10046.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3.1_10046.t1 atgggagctaatagcagtagtatcagtgagctcacgaataacgagtacctgagacgtctgtcggcagcagaacctattaa tcctatagatccattctggaatcagctcctctcctactcattcctcatacctataaacagtactgatgctaagctgcttg aggaatcaacgtcttccatctgtaagaatctagccatacataacactaagagcgggaactttggtgccctcatcagaaac ttccttgtacgagctacagaactgaaagcatcagctcagtgtgaagataacatctttacatggcagacatacaatgccct cttcatcatccgtagcttatgtaagtactttgtggaacatctgagtgaggaacttatactacagcagtttgatgccaaac ctgcagatatgggaggttacacagaccctgaggagatggggcctctggcagaggagctgatgaattcgttggtagaactc ctcgtggatgtcccagtactgagttttacctatgctttacacctggaggctctaaacacactgttagtgttactgtcaat acaaatgtttcagccccagccagccagtaaattcactgtgtatcattgtatgatggaaggtagatgctctatccatgcct gtgtacttgtgaaaacacttcttcgaaatttttccaatcaagagaaatgtcctccagagttatacaagagcagtagtgat gtaaacagtatggtggctaatgtggcagcaagcctttggtcggtgatgactcttggaatgggcactaaaactgagaagaa ggaagaggagtaccaagaaacactcttagccaatcagagcttgttatttctgttggtgttagccaatcattgtacaagtg aacatggactaaataatccatacagacaagctcttgtctcatttacaaactcacaagaccagtcagccaatgcccccacc aaagttgccgctacgttcaaacttaattttacggagttgtataatgcactatgctcttcactgagggatgatcaaacaac attactcctctacttactaatacacagaaatgcaaacatgaaagcttttatattctccagaacaaatatcgatagcctgg tgatgcccttgttaaagatcctatataatgcccaggacaggaattctcatcatatctacatggcccttatcatactactg atactcagtgaggatgatgtctttaacaaagctgtacatgaaatcacactgaagaacattccatggtttaaggagagaac aatctcggagatttcgttgggagggttgttgattctggttgtgatacgtactatacagtataacatgacaaggatgaggc tgtgtaagaagcacagccgtatagtagaggagataagggaggcggctatgtcatctcctacaggtgaccccagtacaccc ggcacagagagtggggaggagggagagcaggatcacatgcaggatttagcagtgttggaggaagtcatacgtatggtact agagataataaactcctgtctggctagctccctccatcataaccctaacctggtctatacactactatacaggaaggaac tctttgatcagttcagaactcatcccacattccaggatatcatacaaaacattgacttggtattagcacacttttcttca cgacttgaacaaagtaaacaccacaatctctctccgagtgaagtattagatattatcacagatggagcaaagcagttcag acgagacaaactcaagaaatttccggacctgaagtttaagtatgtggaggaggaatctccggaggagttttttatcccgt acatctggtctctggtataccactcctctaacatgtactttaacgctgcacggatactactattctcactttcaaataca tga |
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Protein
| Protein ID | pfu_aug2.0_3.1_10046.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3.1_10046.t1 MGANSSSISELTNNEYLRRLSAAEPINPIDPFWNQLLSYSFLIPINSTDAKLLEESTSSICKNLAIHNTKSGNFGALIRN FLVRATELKASAQCEDNIFTWQTYNALFIIRSLCKYFVEHLSEELILQQFDAKPADMGGYTDPEEMGPLAEELMNSLVEL LVDVPVLSFTYALHLEALNTLLVLLSIQMFQPQPASKFTVYHCMMEGRCSIHACVLVKTLLRNFSNQEKCPPELYKSSSD VNSMVANVAASLWSVMTLGMGTKTEKKEEEYQETLLANQSLLFLLVLANHCTSEHGLNNPYRQALVSFTNSQDQSANAPT KVAATFKLNFTELYNALCSSLRDDQTTLLLYLLIHRNANMKAFIFSRTNIDSLVMPLLKILYNAQDRNSHHIYMALIILL ILSEDDVFNKAVHEITLKNIPWFKERTISEISLGGLLILVVIRTIQYNMTRMRLCKKHSRIVEEIREAAMSSPTGDPSTP GTESGEEGEQDHMQDLAVLEEVIRMVLEIINSCLASSLHHNPNLVYTLLYRKELFDQFRTHPTFQDIIQNIDLVLAHFSS RLEQSKHHNLSPSEVLDIITDGAKQFRRDKLKKFPDLKFKYVEEESPEEFFIPYIWSLVYHSSNMYFNAARILLFSLSNT |
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