Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_3.1_10048
Locus scaffold3.1 : 674169 ... 675041 : -
To GenomeBrowser scaffold3.1:674169..675041
Genes list of scaffold scaffold3.1
Synonym pfu_aug1.0_4230.1_16323

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_3.1_10048.t1 gi|528483927|ref|XP_005161819.1| PREDICTED: putative per-hexamer repeat protein 5 [Danio rerio] 2.0e-21
pfu_aug2.0_3.1_10048.t1 gi|156365737|ref|XP_001626800.1| predicted protein [Nematostella vectensis] 8.0e-16
pfu_aug2.0_3.1_10048.t1 gi|541960584|ref|XP_005436027.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like [Falco cherrug] 2.0e-15
pfu_aug2.0_3.1_10048.t1 gi|585693732|ref|XP_006821684.1| PREDICTED: cell wall mannoprotein PIR3-like [Saccoglossus kowalevskii] 3.0e-15
pfu_aug2.0_3.1_10048.t1 gi|260835872|ref|XP_002612931.1| hypothetical protein BRAFLDRAFT_74685 [Branchiostoma floridae] 9.0e-15

Transcript
Transcript IDpfu_aug2.0_3.1_10048.t1
Definition-
>pfu_aug2.0_3.1_10048.t1
atgaatgatggaagcaacagagaacggatgaatgatgaaagaaatagcgaacggatgaatgatggaggcaacagacaacg
gatgaatgatggatgtaacagagaacgggtgaatgatggaagcaatagagaacgggtgaatgatggaagtaacagagaac
ggatgaatgatggaagtaacagagaacgggtgaatgatggaagtaacagagaacgggtgaatgatggaagcaatagagaa
cgggtgaatgaaggaagtaacagagaacggatgaatgatggaagtaacagagaacgggagaatgatggaagtaacagaga
acggtag

Protein
Protein IDpfu_aug2.0_3.1_10048.t1
Definition-
>pfu_aug2.0_3.1_10048.t1
MNDGSNRERMNDERNSERMNDGGNRQRMNDGCNRERVNDGSNRERVNDGSNRERMNDGSNRERVNDGSNRERVNDGSNRE
RVNEGSNRERMNDGSNRERENDGSNRER

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495