Gene
| Gene Model ID | pfu_aug2.0_3.1_10052 |
|---|---|
| Locus | scaffold3.1 : 748632 ... 752346 : + |
| To GenomeBrowser | scaffold3.1:748632..752346 |
| Genes list of scaffold | scaffold3.1 |
| Synonym | pfu_aug1.0_4230.1_16317 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3.1_10052.t1 | 1 | 1 | C1q | 28 | 151 | 6.5e-23 | 81.1 | 1.0e-26 | 7.8e-23 | 80.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3.1_10052.t1 | gi|597787246|ref|XP_007257068.1| | PREDICTED: complement C1q-like protein 4-like [Astyanax mexicanus] | 7.0e-12 |
| pfu_aug2.0_3.1_10052.t1 | gi|585721372|ref|XP_006813255.1| | PREDICTED: complement C1q tumor necrosis factor-related protein 4-like [Saccoglossus kowalevskii] | 8.0e-09 |
Transcript
| Transcript ID | pfu_aug2.0_3.1_10052.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3.1_10052.t1 atgatggggaagggatccgtctgtcttctacttatgtttgttacagtttccctatgccaggatatgaatgtagggaaagc tgctttcagtgcagtccggaatgagaaagcagttctaccaccgttttcagtgattatatttgatgaggtgacgacaaact accaaatggcttacaatgcctcaactggaaatttcaatgctccaagtaatggtatatacgtgttcacatggaccgtagcc accaaatggggacagtggcagacgacacaactcatgtgtaatgacgatgcgatagccaacattgtagctgatagttataa gaacggagatagaagtacagccactggtacaatggttctcagtcttcaagcaaacgatagggtgtacgtgagaaccggac gtcttggtgatcgcatgatcttaaaaaatatgttttgtaccttcagcggatggaagttatatgatttatag |
|
Protein
| Protein ID | pfu_aug2.0_3.1_10052.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3.1_10052.t1 MMGKGSVCLLLMFVTVSLCQDMNVGKAAFSAVRNEKAVLPPFSVIIFDEVTTNYQMAYNASTGNFNAPSNGIYVFTWTVA TKWGQWQTTQLMCNDDAIANIVADSYKNGDRSTATGTMVLSLQANDRVYVRTGRLGDRMILKNMFCTFSGWKLYDL |
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