Gene
| Gene Model ID | pfu_aug2.0_3.1_10053 |
|---|---|
| Locus | scaffold3.1 : 753128 ... 755211 : - |
| To GenomeBrowser | scaffold3.1:753128..755211 |
| Genes list of scaffold | scaffold3.1 |
| Synonym | pfu_aug1.0_4230.1_16316 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3.1_10053.t1 | 1 | 1 | AIG1 | 48 | 199 | 3.3e-18 | 65.5 | 1.0e-19 | 1.3e-16 | 60.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3.1_10053.t1 | gi|688533407|ref|XP_009291146.1| | PREDICTED: GTPase IMAP family member 7 [Danio rerio] | 3.0e-15 |
| pfu_aug2.0_3.1_10053.t1 | gi|548553511|ref|XP_005755574.1| | PREDICTED: GTPase IMAP family member 7-like, partial [Pundamilia nyererei] | 1.0e-14 |
| pfu_aug2.0_3.1_10053.t1 | gi|542224545|ref|XP_005451620.1| | PREDICTED: GTPase IMAP family member 4-like [Oreochromis niloticus] | 2.0e-14 |
Transcript
| Transcript ID | pfu_aug2.0_3.1_10053.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3.1_10053.t1 atggctacagcaggaagagaaagcttacctacttgctcagattctgaactgcgtgttttaatcatgggaagtgactctct ccttcaagcctcaatagctgaatttcttttacaacttcaaaactcatcgaacacttctccaagtgacaggtgtcatgtga cacacaatgttgttggtgacaaggacatcgttgtgataaatgctcctggcctacttgacggtaatctgagtgaagaaaaa ttaaaactagaactacagcgtctatactttcagtcatccccaggtccgcacgtcatgctgtatgtaagtaagtgttacga acgtgatatagacaaggctgtgtatgaaaggatggtcgccatctttggcaaggaattagtggataggtctatttttgtat ttcaggaatatggtgatatgatggatttttctttgtcaatgaggagaccggctaggtttaaaagaaaagtaccggtatct cagagaactcgaaacgaacactctgaattactgagtaaaatagaggaggttgttcaagagtataacggtacgtactttgt aaatgagatgctaagagaggcagaaaaatgtctccaagagcacacaaaaattctgctgtcgaagactcaaactggaaaag aactggaaatgttaaaacaacagcttctggatatgaaatccaagcaggaagaggataagaaaaggatagaagagttagaa ggacgaatacatcaggcaactgaggcgagtaataaaacagaagtgactttgaggaaagaggagcgagataaatttatcaa tgacgaaatgatgcagagagtgtatagaggacttatgtatgttagtgaaaaactcatattacaaggaattgttgtggtgg ttagatcctatctaggattttga |
|
Protein
| Protein ID | pfu_aug2.0_3.1_10053.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3.1_10053.t1 MATAGRESLPTCSDSELRVLIMGSDSLLQASIAEFLLQLQNSSNTSPSDRCHVTHNVVGDKDIVVINAPGLLDGNLSEEK LKLELQRLYFQSSPGPHVMLYVSKCYERDIDKAVYERMVAIFGKELVDRSIFVFQEYGDMMDFSLSMRRPARFKRKVPVS QRTRNEHSELLSKIEEVVQEYNGTYFVNEMLREAEKCLQEHTKILLSKTQTGKELEMLKQQLLDMKSKQEEDKKRIEELE GRIHQATEASNKTEVTLRKEERDKFINDEMMQRVYRGLMYVSEKLILQGIVVVVRSYLGF |
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