Gene
| Gene Model ID | pfu_aug2.0_3.1_10055 |
|---|---|
| Locus | scaffold3.1 : 760473 ... 764321 : - |
| To GenomeBrowser | scaffold3.1:760473..764321 |
| Genes list of scaffold | scaffold3.1 |
| Synonym | pfu_aug1.0_4230.1_16315 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3.1_10055.t1 | 3 | 1 | AIG1 | 92 | 185 | 2.6e-11 | 43.0 | 7.9e-13 | 2.3e-09 | 36.6 |
| pfu_aug2.0_3.1_10055.t1 | 3 | 2 | AIG1 | 200 | 231 | 2.6e-11 | 43.0 | 0.0092 | 27.0 | 3.7 |
| pfu_aug2.0_3.1_10055.t1 | 3 | 3 | AIG1 | 241 | 259 | 2.6e-11 | 43.0 | 0.66 | 2000.0 | -2.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3.1_10055.t1 | gi|688540470|ref|XP_009290431.1| | PREDICTED: GTPase IMAP family member 7-like [Danio rerio] | 4.0e-12 |
| pfu_aug2.0_3.1_10055.t1 | gi|688540407|ref|XP_005158058.2| | PREDICTED: GTPase IMAP family member 7-like [Danio rerio] | 6.0e-12 |
| pfu_aug2.0_3.1_10055.t1 | gi|116487642|gb|AAI25965.1| | LOC100149441 protein [Danio rerio] | 2.0e-11 |
| pfu_aug2.0_3.1_10055.t1 | gi|688540405|ref|XP_009297314.1| | PREDICTED: GTPase IMAP family member 7-like [Danio rerio] | 2.0e-11 |
| pfu_aug2.0_3.1_10055.t1 | gi|528472676|ref|XP_001919315.2| | PREDICTED: GTPase IMAP family member 8 [Danio rerio] | 2.0e-11 |
Transcript
| Transcript ID | pfu_aug2.0_3.1_10055.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3.1_10055.t1 atgacgtgtgttacctgtaatacgtactttaggaccagtcatgacgagggggaatcagatgatatcagacagtgccctca gtgcggagaatggcggtgtgtggtatgttccttcattaatcgaccaaagcagcgggtatgttacgtgtgtaaagcaaaga aaggtgaatgtagcagtcccctgtcacaggaatataccgctacagagccaggtccttcgccatatcctgacaaatcggaa cagacatttccatcaagggagcgggacaaccgatgtcgtgttggctttttatcatacaaaagcctcagtctgagcgtggt gaacacgcctgccttgtttgattcagagctgaaagaacataaaatccagagagaattcagacggatgatattgctatcct ctcctggacctcatctctttcttcatgtcgtagacgaggatgacccggagaataatgaagatacactaggtcaatttatt ggcctttttggtgaagatatgcttaaattcacaatgaagctctgcataagtcgcgaaactaaatcagcagaatcaatgga gggtacactcacactatcagacttaggaaattcccaccaacaaatccttctggaatccattgaaaatttcattatgaaaa acggaggagctcacttcggacatgaactgttcgtggagatacatcaactggttcaacactgcgctgatggtaaattgaag aaagatgaggaacttgtacagaaagtcagggatttagagaaagaaatggagaaaatgaggcttcctagcacaagagactc tcagaaaatcctgaacttggaggcagaaatcagacgatgtaatgccaagcttaagatgcaggaagaacagcgtcttcaag actgcaggaaacgacttattgatgatgaaacattggataaaatatttgctggactgaaagtcgtaggcagtcatcttcta accgtagctctatcattcgcgtttaaaaagttagccctataa |
|
Protein
| Protein ID | pfu_aug2.0_3.1_10055.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3.1_10055.t1 MTCVTCNTYFRTSHDEGESDDIRQCPQCGEWRCVVCSFINRPKQRVCYVCKAKKGECSSPLSQEYTATEPGPSPYPDKSE QTFPSRERDNRCRVGFLSYKSLSLSVVNTPALFDSELKEHKIQREFRRMILLSSPGPHLFLHVVDEDDPENNEDTLGQFI GLFGEDMLKFTMKLCISRETKSAESMEGTLTLSDLGNSHQQILLESIENFIMKNGGAHFGHELFVEIHQLVQHCADGKLK KDEELVQKVRDLEKEMEKMRLPSTRDSQKILNLEAEIRRCNAKLKMQEEQRLQDCRKRLIDDETLDKIFAGLKVVGSHLL TVALSFAFKKLAL |
|