Gene
| Gene Model ID | pfu_aug2.0_30.1_00077 |
|---|---|
| Locus | scaffold30.1 : 1 ... 4525 : - |
| To GenomeBrowser | scaffold30.1:1..4525 |
| Genes list of scaffold | scaffold30.1 |
| Synonym | pfu_aug1.0_328.1_36496 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| nuclear autoantigenic sperm protein isoform x3 | GO:0000790 GO:0001824 GO:0005654 GO:0006260 GO:0006335 GO:0006336 GO:0006810 GO:0007049 GO:0008283 GO:0043234 GO:0043486 GO:0051879 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_30.1_00077.t1 | 2 | 1 | TPR_12 | 56 | 79 | 2.4e-12 | 46.5 | 0.92 | 850.0 | -0.1 |
| pfu_aug2.0_30.1_00077.t1 | 1 | 1 | TPR_11 | 83 | 154 | 5.9e-10 | 38.6 | 2.8e-12 | 2.6e-09 | 36.5 |
| pfu_aug2.0_30.1_00077.t1 | 2 | 1 | SHNi-TPR | 84 | 121 | 4.1e-15 | 54.7 | 2.3e-17 | 2.1e-14 | 52.4 |
| pfu_aug2.0_30.1_00077.t1 | 2 | 2 | TPR_12 | 84 | 154 | 2.4e-12 | 46.5 | 4.7e-15 | 4.3e-12 | 45.7 |
| pfu_aug2.0_30.1_00077.t1 | 2 | 1 | TPR_1 | 84 | 115 | 7.4e-12 | 44.3 | 9.1e-06 | 0.0085 | 15.6 |
| pfu_aug2.0_30.1_00077.t1 | 2 | 1 | TPR_2 | 84 | 114 | 3.6e-10 | 38.9 | 1.5e-05 | 0.014 | 15.2 |
| pfu_aug2.0_30.1_00077.t1 | 2 | 1 | TPR_8 | 87 | 114 | 4.9e-09 | 35.3 | 2.1e-05 | 0.02 | 14.6 |
| pfu_aug2.0_30.1_00077.t1 | 2 | 2 | TPR_1 | 126 | 154 | 7.4e-12 | 44.3 | 3.5e-09 | 3.2e-06 | 26.5 |
| pfu_aug2.0_30.1_00077.t1 | 2 | 2 | TPR_2 | 126 | 154 | 3.6e-10 | 38.9 | 1.9e-07 | 0.00018 | 21.1 |
| pfu_aug2.0_30.1_00077.t1 | 2 | 2 | TPR_8 | 127 | 154 | 4.9e-09 | 35.3 | 4.1e-07 | 0.00038 | 20.0 |
| pfu_aug2.0_30.1_00077.t1 | 2 | 2 | SHNi-TPR | 141 | 154 | 4.1e-15 | 54.7 | 0.48 | 450.0 | 0.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_30.1_00077.t1 | gi|676424003|ref|XP_009044174.1| | hypothetical protein LOTGIDRAFT_55307, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_30.1_00077.t1 | gi|291229792|ref|XP_002734855.1| | PREDICTED: histone-binding protein N1/N2-like [Saccoglossus kowalevskii] | 3.00018e-42 |
| pfu_aug2.0_30.1_00077.t1 | gi|617664322|ref|XP_007538526.1| | PREDICTED: nuclear autoantigenic sperm protein isoform X3 [Erinaceus europaeus] | 2.0e-40 |
| pfu_aug2.0_30.1_00077.t1 | gi|4104353|gb|AAD02006.1| | nuclear autoantigenic sperm protein autosomal variant [Homo sapiens] | 2.0e-40 |
| pfu_aug2.0_30.1_00077.t1 | gi|119627371|gb|EAX06966.1| | 4.00001e-40 |
Transcript
| Transcript ID | pfu_aug2.0_30.1_00077.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_30.1_00077.t1 atggtaaattttatgcctgaggagggtgacacggctgaggaggaaggtgaagaggaaggagaggaagaggagggtgagga cacggctgaggaggatacagctgaggaaacttcacaagatgaggcagaaagtggagagaagaaagagaatccagatgaca tatcaaatttacagttagcctgggagatgttggaattagccaaggttatttatctcaaagatgaagctaaggaagcaaaa ctgaaggctgctgaatcattcctaaagctgggagaagtcagtctagaaactgaacaatacgagcaggctgtgtcagattt taaggaatgtcttaagatccaggagagtgtcttagaagcggaagacagactactggccgagacacactaccaactgggac tagcatatgggtttgacaagaaatatgatgaatctattacacactataaaaaggcaatacagggcatagaagataaagta gcaaaactgtcaaaggttgtagaagcaaatgcagaaagtaaagacaaaggaaaag |
|
Protein
| Protein ID | pfu_aug2.0_30.1_00077.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_30.1_00077.t1 MVNFMPEEGDTAEEEGEEEGEEEEGEDTAEEDTAEETSQDEAESGEKKENPDDISNLQLAWEMLELAKVIYLKDEAKEAK LKAAESFLKLGEVSLETEQYEQAVSDFKECLKIQESVLEAEDRLLAETHYQLGLAYGFDKKYDESITHYKKAIQGIEDKV AKLSKVVEANAESKDKGK |
|